Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2613 |
Symbol | pyrC |
ID | 3518808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2715585 |
End bp | 2716652 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285067 |
Product | dihydroorotase |
Protein accession | YP_269327 |
Protein GI | 71278591 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0418] Dihydroorotase |
TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAATG AAAGCAATAC CTCAAATGAT ACCTTAAGTA ACACCTTAAC TATCGCTCGA CCTGATGATT GGCACGTACA TTTACGTGAT GGCGCCGTTT TAAAAAATAC GGTGGCTGAT ATTAGTCGTT ATTTTGGTAG AGCTATTGTT ATGCCAAATT TAGTGCCTCC AGTAACCGAT GCAGCTTTAG CAGAAAGTTA CTATCAGCGA ATTATGGCAG CAGCCCCAAG TGCTCACTTT AAGCCATTAA TGGTTTTATA TTTAACAGAT AACACCAGCG CACAAGATAT TATTGAAGCG AAAGAATCAG GTTTAGTTTA TGCGGCAAAA TTATATCCAG CCGGTGCAAC AACAAACTCT TCATCGGGTG TAACTGATGT TGCCAATTTA ACTGACGTAT TTGCAGCAAT GCAATCGGTT GAAATGCCAT TATTAGTTCA CGGTGAAGTA ACTGCTGCTG ATATTGATAT TTTTGATAGA GAGCAGGTTT TTGTTGATAC TATTTTAAAA CCATTGGTCG CTAATTTTCC TGATCTTAAA GTAGTTTTAG AGCATATAAC CACTAAAAAT GCGGTTGATT TTGTTAAAAC TGCTGGTGAT AATGTTGGCG CTACTATTAC CGTACACCAC TTATTGTTTA ACCGTAACCA CATGTTAGTT GGCGGTATTC GTCCGCATTT CTTCTGTTTA CCTATTTTAA AACGTAATAC TCATCAACAA GCATTAATAG AAGCAGCAAC AAGCGGCGAC AAAAAATTCT TCTTAGGTAC TGATTCTGCG CCACATGCTC AACATGCTAA AGAGTCAGCT TGTGGTTGCG CTGGTGTTTA TTCTGCCCAC GCAGCGATTG AGTTATATGC TGAAGTATTC GAACAAGAGA ATGCATTGGA CAAATTAGAA GCATTTGCCA GCCTTAATGG TGCAAACTTC TATCAATTAC CGATAAGCAC AGATAAAATA ACGCTAGTTA AAAAAGCATG GAAAGTACCA GCAACAATGA GCTTTGGCGA TGATGTTGTT GTGCCTGTTC GTGCCGATGA AGAGATTTTG TGGCAAGTAG AGGGTTAA
|
Protein sequence | MTNESNTSND TLSNTLTIAR PDDWHVHLRD GAVLKNTVAD ISRYFGRAIV MPNLVPPVTD AALAESYYQR IMAAAPSAHF KPLMVLYLTD NTSAQDIIEA KESGLVYAAK LYPAGATTNS SSGVTDVANL TDVFAAMQSV EMPLLVHGEV TAADIDIFDR EQVFVDTILK PLVANFPDLK VVLEHITTKN AVDFVKTAGD NVGATITVHH LLFNRNHMLV GGIRPHFFCL PILKRNTHQQ ALIEAATSGD KKFFLGTDSA PHAQHAKESA CGCAGVYSAH AAIELYAEVF EQENALDKLE AFASLNGANF YQLPISTDKI TLVKKAWKVP ATMSFGDDVV VPVRADEEIL WQVEG
|
| |