| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2536 |
|---|
| Symbol | |
|---|
| ID | 3519907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2644718 |
|---|
| End bp | 2645035 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637284990 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_269251 |
|---|
| Protein GI | 71279448 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00800306 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTGA TCTCAAATAC ACCTAAACCG CCATACTTTG CCGTAATCTT CACGTCTACA
AGGACTGAAG GTGATAATGG GTATGGTGAA ATGGCCAACA GAATGGTTGA ATTAGCACAG
CAGCAATCAG GATTTTTGGG CATTGAATCA GCCAGAGAAG AGCTTGGTAT CACTGTTTCT
TATTGGACAG ACCTCGACTC TATTAAAAAC TGGAAGGCGA ACGTGGAACA TTTAGAAGCT
CAAAAAACGG GTCGTAAGTC TTGGTATGAT TCGTTTAAAG TGCGAATTTC AAAAGTAGAA
CGCGATTACG GTAACTAA
|
|---|
| Protein sequence | MSLISNTPKP PYFAVIFTST RTEGDNGYGE MANRMVELAQ QQSGFLGIES AREELGITVS
YWTDLDSIKN WKANVEHLEA QKTGRKSWYD SFKVRISKVE RDYGN
|
|---|
| |