Gene CPS_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2508 
Symbol 
ID3518387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp2617051 
End bp2617665 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content36% 
IMG OID637284963 
Productamino acid transporter LysE 
Protein accessionYP_269224 
Protein GI71278794 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.315866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATT TAATCGCAAT TGTACTGTTT GCAATCTCAT CGTCAGTTAC TCCTGGTCCA 
AACAATATTA CGATTATGGC TTCTGGTGTC AATTTTGGTA TTCGTAGAAG TATGCCATTA 
TTTTTGGGGA TCTGTGTTGG GTTTGCCGTA ATGTTACTGC TTGTCGGTAT TGGTTTTGGG 
CAGATCTTTG AAAAAATTCC TACTTTACAT ATCTTTATAA AATTTATTGG TACCTTGTAT 
TTACTGTATT TAGCTTTTTT AATCGCTACG GCTGATGAAA TAACTATGTC AAATACTCCA 
GCCAAGCCGT TAACTTTCAT GAAAGGCGCT TTGTTTCAAT GGTTGAATGC AAAGGCTTGG 
GTGGTAGCAA CGGGAGCAAT AGCTGCGTTT ACAACCGTTG GTGTAGATTT TTACACCCAA 
AATATCATCA TAGCCTTAAC ATTTTTGGTT ATCTCGTTTC CTTGTGTAGG TATTTGGTTG 
TTTTTCGGAT CAACGTTGAA AAAGCGACTT AAATCTAAAC AACACCGGAA AGTGTTTAAC 
TATTCTATGG GGGGATTATT AGTTATATCA GTAATCCCTG TAATAAAAGA ATTGAGTGTT 
CAACTTACCC AATAA
 
Protein sequence
MDYLIAIVLF AISSSVTPGP NNITIMASGV NFGIRRSMPL FLGICVGFAV MLLLVGIGFG 
QIFEKIPTLH IFIKFIGTLY LLYLAFLIAT ADEITMSNTP AKPLTFMKGA LFQWLNAKAW 
VVATGAIAAF TTVGVDFYTQ NIIIALTFLV ISFPCVGIWL FFGSTLKKRL KSKQHRKVFN 
YSMGGLLVIS VIPVIKELSV QLTQ