Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2477 |
Symbol | glyA |
ID | 3520009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2594017 |
End bp | 2595270 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637284932 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_269193 |
Protein GI | 71279550 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTACA AAAATGATCA AATAGCCGGT TTCGATGACA GTATTTGGCA AGCCATGGAG CAAGAAGACA AACGTCAACA AGATCACGTT GAATTAATTG CCTCAGAAAA CTATACCAGT GCGCGCGTGA TGCAAGCCCA AGGCAGTCAA CTGACCAACA AATACGCCGA AGGTTATCCT GGTAAACGTT ATTACGGCGG CTGTGAACAC GTTGATGTGA TTGAGCAACT GGCGATTGAT CGTGCAAAAG AATTGTTCGG CGCTGATTAC GCCAATGTAC AACCCCATTC TGGCTCACAA GCCAATGCCG CAGTATTTAT GGCCTTGCTT AAGCCCGGTG AAACGGTGCT CGGCATGAGC TTAGCGCACG GTGGTCATTT AACCCACGGC TCTAAAGTAA GCTTCTCTGG TAAAATTTAT AACGCAGTGC AATACGGCTT AAATGAAGCA ACCGGTGAAA TTGACTACGA AGAAGTCGAG CGTCTTGCAA AAGAGCATCA ACCGAAAATG ATTATTGCCG GTTTCTCAGC GTATTCACGT GTGGTTGATT GGCAGCGTTT TCGTGACATT GCCGATAGCA TTGGCGCGTG GTTATTTGTC GATATGGCGC ACGTAGCTGG TTTAGTGGCG GCAGGTCTTT ATCCTAACCC GGTACCGATT GCGGATGTGG TGACTACCAC TACCCATAAA ACCTTACGTG GTCCTCGTGG CGGTTTGATT TTAGCGAAAC AAAATGACGA ACTGGCTAAG AAATTAAATT CAGCGGTATT CCCTGCCGGT CAAGGTGGCC CGTTGATGCA TGTTATCGCG GCCAAAGCGA TTTGTTTCAA AGAAGCACTT GGCGAGGGTT ATGTTGAGTA TCAGCAACAG GTTATCGATA ACGCCCGTGA AATGGCAAAA ACATTCCAAA CCCGTGGTTA TAACGTAGTT TCTGGCGGTA CGGACAATCA TTTATTTTTA TTGGATTTAA TCGATAAAGG TATTACCGGT AAAGACGCCG ATGCTGCGCT TGGCCGCGCT AATATCACGG TCAATAAAAA CTCCGTGCCT AACGACCCAC AATCACCATT TGTCACCAGT GGTCTGCGTA TCGGCACACC AGCCATCACC AGTCGTGGTT TTGGACTTGA GGAAGCAGCA GCATTAACGG GTTGGATTTG TGATGTGTTA GATGACATTA GCAATGAGCA AGTGATTGAT GACGTGCGAA GTAAAGTGTT GGACTTATGT GAAAAAAATC CGGTCTACCG CTAG
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Protein sequence | MFYKNDQIAG FDDSIWQAME QEDKRQQDHV ELIASENYTS ARVMQAQGSQ LTNKYAEGYP GKRYYGGCEH VDVIEQLAID RAKELFGADY ANVQPHSGSQ ANAAVFMALL KPGETVLGMS LAHGGHLTHG SKVSFSGKIY NAVQYGLNEA TGEIDYEEVE RLAKEHQPKM IIAGFSAYSR VVDWQRFRDI ADSIGAWLFV DMAHVAGLVA AGLYPNPVPI ADVVTTTTHK TLRGPRGGLI LAKQNDELAK KLNSAVFPAG QGGPLMHVIA AKAICFKEAL GEGYVEYQQQ VIDNAREMAK TFQTRGYNVV SGGTDNHLFL LDLIDKGITG KDADAALGRA NITVNKNSVP NDPQSPFVTS GLRIGTPAIT SRGFGLEEAA ALTGWICDVL DDISNEQVID DVRSKVLDLC EKNPVYR
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