Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2291 |
Symbol | |
ID | 3519377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2391873 |
End bp | 2392529 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284748 |
Product | HAD family hydrolase |
Protein accession | YP_269011 |
Protein GI | 71279136 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.265516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAT TAGTTATCTT TGATTGGGAT GGCACTTTGA TGGATTCTAT TGCTCGTATT GTGTCATCAA TGCAAGCGGC AGCCGATCAC TGTCAGTTAA CCATACCTAC AGTCAAGGGT GTAAAAGATA TCATTGGCCT AAGTTTACCT AAAGCTCTTG ATATCTTATT CCCGGGGGCT TCTCAAAGCC AAACTACAGC ATTGCTTGAG CAATATAAAT TTCAATATGT TGAAGGTGAT AATACTCCAG CACCTTTATT TGAAGATGCT CTATCGTTAT TAAAAGCACT TAAGGATAAT AATAGATTGT TAGCTGTGGC AACAGGTAAA GGCCGTGATG GTTTACAACG AGTCTTTTCG GCTACCCAAA CTGAACATTT CTTTCATGCG TCACGCTGTG CAGATGAGGC ACTTTCTAAA CCTGACCCAC AGATGTTATT GAGTTTATTA GCAGAGCTGA GTGTTGAGCC AGAGCAAGCG GTTATGATTG GAGATACTAA TCATGATATG CAAATGGCTC AAGCAGCGGG TATTGATAGA ATAGGCATTA CCTTAGGTGT GCATGATCGA GAGATATTAA ACCACTATCA ACCAATAGCC GTTGTTGACT CCCTTATCGA GTTACAACAG TTATTATTAC CAGTAGTAGA ACACTGA
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Protein sequence | MYKLVIFDWD GTLMDSIARI VSSMQAAADH CQLTIPTVKG VKDIIGLSLP KALDILFPGA SQSQTTALLE QYKFQYVEGD NTPAPLFEDA LSLLKALKDN NRLLAVATGK GRDGLQRVFS ATQTEHFFHA SRCADEALSK PDPQMLLSLL AELSVEPEQA VMIGDTNHDM QMAQAAGIDR IGITLGVHDR EILNHYQPIA VVDSLIELQQ LLLPVVEH
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