| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2290 |
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| Symbol | rluC |
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| ID | 3520678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2390779 |
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| End bp | 2391861 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284747 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_269010 |
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| Protein GI | 71280214 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA CTAAGACTCA AAAAGCCAAT CACGTGCCTA AAATTAAATT AAAGACCAAA
CATCACTCAG TTGTAAAAAA GCCCCAACAG AAAAAAATCA CGCCTGAAAA ACCCGTTCAA
GAGAAAATCG CTCCTGAGCC TGAAAAGCCA AAAGTACGCT TTATTACCAT AGATAGTGAA
GATGCAGGGC AGCGTATTGA TAATTTTTTA TTAAGAACAC TTAAGGGAGT TCCTAAAAGT
CACCTTTATC GTTTAATGCG TAAAGGCGAG ATAAGAGTTA ATAAAAAACG GATCAAACCT
GTTTATAAAT TACTTATCGA TGATGAAGTA CGTATTGCTC CTATTAGAGT TTCAGAAGAA
AAAGATGCAG TGTCAACGGG ATTACACATA GTAGCTAATC TAGAAAAACA AATTCTTTTT
GAAGATGACC GATTAATTGT TATCAATAAA CCATCAGGTA TGGCTGTACA TGGTGGTAGC
GGCTTAAGCT TTGGATTGAT TGAAGCGCTA CGTGCGTTAA GACCAGAAGC GCGAATGTTA
GAACTCGTCC ATAGATTAGA CAGAGATACC TCTGGTTGCT TAATGGTCGC CAAGAAGCGT
TCGACCTTGC GTCATTTGCA TGAACAGTTT CGTGATAAAA ATGTACAAAA GTTTTATCAT
GCGTTAGTGA AAGGTCACTG GCCGACTAAG TTAACTCGCG TTACTGATGC ACTAAAGAAA
AATGATTTGA AATCAGGCGA ACGAGTGGTA GTTGTCGATA ACCAACTAGG AAAAGAGTCT
GAAACACGTT TTAGAGTGTT GGAACGTTAT CGTGGTGCAA CACTGGTGAG AGCTTTTCCT
GTAACGGGAA GAACACATCA AATACGAGTT CACTGTCAAA CGAGTGGTCA CTCTATTGCT
ATGGACGCAA AATATGGTCA TGAAGAGTTT GACGAGCAAA TGAAAAGCAA AGGGTTGAAA
CGCCTTTTCT TACATGCAGC GAGTATTGAA TTTACTCATC CAAACACGGA GCAGCGATTA
AAAATTGAAG CACCGCTTGA AGCTAGTTTA GAGAAACTAT TGTCTAAGTT AGTTAAAGAG
TAA
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| Protein sequence | MKETKTQKAN HVPKIKLKTK HHSVVKKPQQ KKITPEKPVQ EKIAPEPEKP KVRFITIDSE
DAGQRIDNFL LRTLKGVPKS HLYRLMRKGE IRVNKKRIKP VYKLLIDDEV RIAPIRVSEE
KDAVSTGLHI VANLEKQILF EDDRLIVINK PSGMAVHGGS GLSFGLIEAL RALRPEARML
ELVHRLDRDT SGCLMVAKKR STLRHLHEQF RDKNVQKFYH ALVKGHWPTK LTRVTDALKK
NDLKSGERVV VVDNQLGKES ETRFRVLERY RGATLVRAFP VTGRTHQIRV HCQTSGHSIA
MDAKYGHEEF DEQMKSKGLK RLFLHAASIE FTHPNTEQRL KIEAPLEASL EKLLSKLVKE
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