| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2207 |
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| Symbol | pnp |
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| ID | 3518463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2305949 |
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| End bp | 2308066 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284664 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_268932 |
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| Protein GI | 71278713 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATC CAATTACTAA AAAATTTCAA CTTGGTAAAC ATACAGTAAC ACTTGAAACA
GGTGCAATTG CACGTCAAGC ATCAGCTGCA GTTATGGCAA GCATGGACGA TACCTGTGTA
CTTGTTTCAG TTGTAGGTAA AAAAGAAGCG AAACCAGGAC AAGATTTCTT CCCATTAACA
GTGAACTACC AAGAGCGTGC TTACGCTGCT GGTAAAATTC CTGGAAGTTT CTTTAAACGT
GAAGGCCGTC CTTCAGAAGA AGAAACACTT ATTGCACGTC TAATTGACCG TCCAATTCGT
CCATTATTCC CAGAAGGTTT CACTAACGAA GTACAAGTTA TTATCACTGT TGTTTCAGTT
AACCCTGAAA TTGCACCTGA TATTATTTCT TTAATTGGTA CTTCTGCAGC ATTAGCTATT
TCAGGTCTTC CATTTAGTGG TCCTGTTGGC GCAGCACGCG TTGGTTATAC TGACGGTCAA
TACATTCTTA ACCCGCTTCA ATCTGAATTA CCAACAAGTC AATTAGACCT AGTTGTATCA
GGTACTGATT CAGCGGTATT AATGGTTGAA TCTGAAGCTG ACGTATTGTC TGAAGAAGTA
ATGCTTGGTG CTGTTGTATA TGGCCATGAG CAAATGCAAG TAGCTGTTTC AGCAATCAAA
GAATTTAAAG CAGAAGTTAA CACTCCTTCA TGGGATTGGG TTGCTCCTGT TAAAAATGCT
GAATTATTAG CTAAAATTGC TGAACTTAGT GAAGCACAAG TTAACGAAGC ATACCAAATT
ACTGAAAAAG CTGTTCGTTA CGAGAAAATT AAAGAAATCC GTAGCTCAGT ACTTGAAGCG
TTATTAGCAG AAAATGCTGA TGTTGACGTT CAAGAAGCTA AAGATTTGTT CCATGATTTA
GAAAAAACTG TGGTACGTGG CCGTATTACT GATGGCAACC CTCGTATCGA TGGTCGTGAT
CCTGAATCAA TTCGTGCTTT AGACGTGATG ACAGGTGTAT TACCAAGAAC TCATGGTTCT
GCAGTATTTA CACGTGGTGA AACTCAAGCA TTAGTTACAG CTACGCTTGG TACTCAACGT
GATGCACAAC GTCTTGATAC GTTAATGGGT GATAAGACTG ACCCATTCAT GCTTCATTAC
AACTTCCCTC CTTATTGTGT AGGTGAGACT GGATTTGTTG GTAGCCCGAA GCGTCGTGAA
ATTGGCCATG GCCGTTTAGC GAAACGTGGT ATGTTGGCAG TTATGCCTTC ACTTGAAGAA
TTCCCGTATG CAGTACGTGT TGTTTCTGAA ATCACTGAAT CAAATGGTTC ATCTTCAATG
GCTTCAGTAT GTGGTACTTC ATTAGCACTT ATGGATGCTG GTGTTCCAAT TAAAGCATCT
GTTGCTGGTA TCGCAATGGG TCTTGTTAAA GAAGGCGAAA AATTCGTTGT TCTTTCTGAC
ATCTTAGGTG ATGAAGATCA CTTAGGTGAC ATGGACTTTA AAGTAGCGGG TACCACTGGT
GGTATTACTG CACTTCAAAT GGACATTAAA ATTGAAGGTA TTACTCAAGA AATTATGCAG
ATTGCTTTAA ACCAAGCAAA AGCTGCACGT ACTCACATTT TATCTGTAAT GGATGAAGCT
ATTGGTGGAC ACAGAGATGA TATCTCTGAA TTCGCTCCTC GCATTCATAC AATGAAAGTT
AGCCAAGATA AGATTCGTGA CATCATTGGT AAAGGCGGCG CAACTATTCG TCAACTTACT
GAAGAAACGG GTACTACTAT TGAAATCGAA GATGACGGCA CAGTTAAAAT TGCTGCAACT
TCTGGTGAGC AAGCTGAAGA TGCAATCAAC CGCATTAAAG CACTAACTGC TGAAATTGAA
GTAGGTACAC TTTACACAGG TAAAGTTGTT CGTATCGTTG ATTTTGGTGC GTTCGTTAAT
GTTCTTCCAG GTAAAGATGG TTTAGTACAT ATTTCACAAA TCTCTGAAGA GCGCGTTAAT
AACGTAAGTG AAGTATTAAC TGAAGGTCAA GAAGTGAAAG TTAAAGTACT TGAAGTTGAC
CGTCAAGGCC GTGTACGTTT AAGTATCAAA GAAGCTATGG AAAAACCAGC TGCAGAAGCA
ACACCAGCTG CTGAGTAA
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| Protein sequence | MLNPITKKFQ LGKHTVTLET GAIARQASAA VMASMDDTCV LVSVVGKKEA KPGQDFFPLT
VNYQERAYAA GKIPGSFFKR EGRPSEEETL IARLIDRPIR PLFPEGFTNE VQVIITVVSV
NPEIAPDIIS LIGTSAALAI SGLPFSGPVG AARVGYTDGQ YILNPLQSEL PTSQLDLVVS
GTDSAVLMVE SEADVLSEEV MLGAVVYGHE QMQVAVSAIK EFKAEVNTPS WDWVAPVKNA
ELLAKIAELS EAQVNEAYQI TEKAVRYEKI KEIRSSVLEA LLAENADVDV QEAKDLFHDL
EKTVVRGRIT DGNPRIDGRD PESIRALDVM TGVLPRTHGS AVFTRGETQA LVTATLGTQR
DAQRLDTLMG DKTDPFMLHY NFPPYCVGET GFVGSPKRRE IGHGRLAKRG MLAVMPSLEE
FPYAVRVVSE ITESNGSSSM ASVCGTSLAL MDAGVPIKAS VAGIAMGLVK EGEKFVVLSD
ILGDEDHLGD MDFKVAGTTG GITALQMDIK IEGITQEIMQ IALNQAKAAR THILSVMDEA
IGGHRDDISE FAPRIHTMKV SQDKIRDIIG KGGATIRQLT EETGTTIEIE DDGTVKIAAT
SGEQAEDAIN RIKALTAEIE VGTLYTGKVV RIVDFGAFVN VLPGKDGLVH ISQISEERVN
NVSEVLTEGQ EVKVKVLEVD RQGRVRLSIK EAMEKPAAEA TPAAE
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