| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2205 |
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| Symbol | truB |
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| ID | 3520371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2304098 |
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| End bp | 2305054 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284662 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_268930 |
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| Protein GI | 71279909 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.344514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC GTAGAAAAGG CCGTCAGGTC AATGGTGTTT TGTTATTAGA TAAGCCCCAT
GGACTGTCAT CAAACCATGC TTTACAAACA GTTAAGCGAA TTTACTTTGC CCAGAAAGCA
GGTCATACGG GTGCATTAGA CCCATTAGCA ACGGGTATGT TACCAATTTG TCTAGGTGAG
GGAACTAAGT TCTCACAGTA CTTACTTGAT ACAGATAAAA CCTATCAAGT AACCGCCAAG
CTGGGTATTC GTACTACGAC AAGTGATGCT GGTGGTGAAG TTGTCAGTGA AAAAACAGTT
GACGTTTCAA GTGAGCAGTT AGCGAAAGCT TTAGACAGTT TTCGTGGTAC AACTAAACAA
GTTCCGTCTA TGTATTCTGC ACTAAAACAT CAAGGTCAGC CTTTATATAA ATATGCTAGA
GAAGGTATTG AAGTACCGCG CGAAGCACGT GATATCACGG TATTTAATCT TGAGTTATTA
CGTTTTGAAC ATGATGAAGT TGAACTAAAT ATTCATGTTT CTAAAGGGAC TTATATCCGA
ACTATCGTTG ATGATTTAGG GGAATTATTA GGTTGTGGTG CTCATGTGGC TCACCTTAGA
CGTTCTGCTG TAGGTAATTA TCCGGTAGAA AAAATGATAA CACTGCCTGA GCTTGAAGCC
TTACTTGAAC AAGCTAATGC GGATGAAATA ACGCCCTCGG ATGTTCTTGA CCCATTGTTG
TTGCCTATGA ATAGTGCTGT CGATGGTATG CATTGTGTCT ATGTTGATGA TATGTCAGCC
AATTTCCTAC GTCACGGTAA CCCAGTACAA GCTTATAACC AGCCTGAAGC AGGCAGTGTT
CAAGTGTACC TTGGCGAAGA TGAAAATGAT GCTGACGCTG AATTTATTGG CGTAGGTTTT
ATCAATGATG ATGGTTTAGT TGCACCTAAA CGTATCGTTG TTCTAGAACA GTACTAG
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| Protein sequence | MAKRRKGRQV NGVLLLDKPH GLSSNHALQT VKRIYFAQKA GHTGALDPLA TGMLPICLGE
GTKFSQYLLD TDKTYQVTAK LGIRTTTSDA GGEVVSEKTV DVSSEQLAKA LDSFRGTTKQ
VPSMYSALKH QGQPLYKYAR EGIEVPREAR DITVFNLELL RFEHDEVELN IHVSKGTYIR
TIVDDLGELL GCGAHVAHLR RSAVGNYPVE KMITLPELEA LLEQANADEI TPSDVLDPLL
LPMNSAVDGM HCVYVDDMSA NFLRHGNPVQ AYNQPEAGSV QVYLGEDEND ADAEFIGVGF
INDDGLVAPK RIVVLEQY
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