| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2114 |
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| Symbol | aspS |
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| ID | 3519645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2202254 |
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| End bp | 2204059 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284572 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_268840 |
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| Protein GI | 71278161 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.454587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGTC TTTATTGTGG TGAGGTGAAC GAATCTCACA TTGGACAAGA AATAACTTTA
TGTGGTTGGG TTAACAAACG TCGTGATTTA GGCGCCGTGA TCTTTTTAGA TTTACGTGAC
CGTGAAGGTC TTGTTCAAGT TGTTTATGAT CCTGATTTAC CTGAGGTGAT TAAAAAAGCC
AACACCTTAC GTAATGAATT TTGTGTACAA ATTAAAGGTA AAGTTCGCGC TCGTCCTGAA
GGCCAAGTAA ATAAAGGCAT GAAAACGGGT GGTATTGAAG TACTTGGTCT AGAACTTACC
ATTCTAAATA AGTCAGCGCC ATTGCCTTTA GACTCTAATC AAGTCAACTC AGAAGAACTT
CGCCTTAAAT ACCGTTATTT AGATTTACGC CGTGTTGAAA TGACTGAACG TTTACGTTTC
CGCGCTAAAG TAACTTCTGC AGTGCGTAGT TCACTTGAGT CTCAAGGTTT TTTAGATATT
GAAACACCGA TACTAACAGC GGCTACTCCT GAAGGTGCAC GTGACTATTT AGTTCCTAGT
CGTACTCATA AAGGTCAATT TTTCGCTTTG CCACAATCAC CACAATTGTT TAAACAATTA
TTGATGATGT CGGGTATGGA ACGTTACTAT CAAATAGTTA AATGTTTCCG TGATGAAGAT
TTACGTGCTG ATAGACAGCC TGAATTCACA CAAATAGATA TTGAGACCTC GTTCATGAGT
AGTGATCAGG TAATGGAAGT AACGGAAAAA ATGATCCGTG AATTATTCCA AGAGTTGCTT
GATGTTGACT TAGGTGAGTT CCCGCGTATG CCTTACTCTG AGGCAATGAC ACGTTTTGGT
AGTGATAAGC CAGACTTACG TAACCCATTA GAGTTAATTG ATGTTGATGA TATTTTAAAA
GATGTTGAAT TTAAAGTATT TTCAGGACCA GCGAACGATG AAAATGGCCG TGTTGCAGTA
ATTTGTTTGC CTCAAGGTGC AGCTAAATTC TCACGTAAGG GCCTTGATGA ATTAACCAAA
TTTGTTGGCA TTTACGGCGC TAAAGGTATG CCTTGGTTAA AAGTGAATGA TATTGATGCG
GCTCTTTCAA CAGGTGTTGA AGGTTTGCAG TCACCCATCT TAAAATTCTT ATCAAGTGAT
GAAGCTATCG CTTTATTAAA ACGTACAAAT GCGAAAACAG GCGATATTAT TTTCTTTGGT
GCAGACCAAT ATAATGTTGT AACTGAATCT TTAGGTGCAC TTCGCCTTAA ATTAGGTGAA
GAACTTGATT TACTTCAAGG TGAATGGAAA CCTCTTTGGG TAGTTGATTT CCCAATGTTT
GAAGAAGTAG ATGGCCATAT GCATGCTATT CATCATCCGT TTACTGCACC GACTAATTTA
ACCGCTGAGC AGTTAGAAGC AAATCCTGTT GGCGCTTTAT CAGATGCTTA TGACATGGTC
TTAAATGGCT GTGAACTTGG TGGTGGCTCT GTACGTATTC ACAATCAAGA TATGCAAGCA
GCAGTATTTA GAATTTTAGG CATTAGTGAT GAAGAAGCAG AAGAGAAATT TGGCTTCTTA
CTTGAAGCGC TACAATATGG TGCGCCGCCA CATGCTGGTT TAGCCTTTGG CCTAGACAGA
TTAGTGATGT TAATGACAGG TGCAAGTTCA ATCCGTGACG TAATGGCTTT CCCAAAAACC
AATACAGCGG CTTGTCCATT AACTAACGCA CCGGGTAAAG CTAACCCTGA ACAGTTAAGA
GAATTAGGCG TTGCTGTTCT TGAAGTAAAG AAAGCTGAAG AGAACAAAGA CGAAGAACAA
GCATAA
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| Protein sequence | MRSLYCGEVN ESHIGQEITL CGWVNKRRDL GAVIFLDLRD REGLVQVVYD PDLPEVIKKA
NTLRNEFCVQ IKGKVRARPE GQVNKGMKTG GIEVLGLELT ILNKSAPLPL DSNQVNSEEL
RLKYRYLDLR RVEMTERLRF RAKVTSAVRS SLESQGFLDI ETPILTAATP EGARDYLVPS
RTHKGQFFAL PQSPQLFKQL LMMSGMERYY QIVKCFRDED LRADRQPEFT QIDIETSFMS
SDQVMEVTEK MIRELFQELL DVDLGEFPRM PYSEAMTRFG SDKPDLRNPL ELIDVDDILK
DVEFKVFSGP ANDENGRVAV ICLPQGAAKF SRKGLDELTK FVGIYGAKGM PWLKVNDIDA
ALSTGVEGLQ SPILKFLSSD EAIALLKRTN AKTGDIIFFG ADQYNVVTES LGALRLKLGE
ELDLLQGEWK PLWVVDFPMF EEVDGHMHAI HHPFTAPTNL TAEQLEANPV GALSDAYDMV
LNGCELGGGS VRIHNQDMQA AVFRILGISD EEAEEKFGFL LEALQYGAPP HAGLAFGLDR
LVMLMTGASS IRDVMAFPKT NTAACPLTNA PGKANPEQLR ELGVAVLEVK KAEENKDEEQ
A
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