Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2083 |
Symbol | |
ID | 3519249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2165024 |
End bp | 2166169 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284542 |
Product | FMN-dependent dehydrogenase |
Protein accession | YP_268810 |
Protein GI | 71279242 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.443709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACTA AATGTTTTAA TATTGAAAAC TTACACCAAT TAGCTAAAAA AAGACTTCCT AAAGCTATTT TTGACTATAT GGCTGGAGGG TCTGATGATG AGAAAGCGCT CGCAAATAAT ACCTCAGCTT TTGACCGATA TCAGTTAATA CCTAATGTGC TCAGAGATGT TAGAGATATA AATATCAAAA GTAAGGTCTT TGGTTGTGAA ATTGAGATGC CTTTTTATAT TTCACCGATA GGGCAGTCTC GATTTTTTCA CCCTGATTCT GATATTGCTG GCGTTAAGGC AGCGGCTAAA ATGAAAACGC TATTTACCTT GTCAACTTTT TCAGGGAAGC CGTTAGAAGA GGTTGCGCAG GCTACAACGT CAGATAAAGC ATTTCAAGTT TATGTATTAA CAGATAAAGA ACAAAATAAG CGTTTACTCG ATCGCTGTAA AAAAGCAGGT TATAAAGCTT TGGTATTAAC AGTAGATACC ATAGTGGCAG GAAATAGAGA GCGAGATTTA GTGAATGGTT TAACTATTCC TCCTAAACTC AGTTTGTCGA GCGCAGTAGA TTTTGCTTGT AAACCACGCT GGGTTTTCAA TTATGTAACA GATAAAGGGC GTGATTTAGC CAATTTAGAA AGTGTCCCTC CGATGAAAGA TACTGCCCAA TTTCTTCAGT ACATGAAAGG GCTCCTTGAG CCAAACCTAA CATGGCAACA TGCCAAAGAT ATGATTGAAT ACTGGGGGGG GAAGTTCGCT ATTAAAGGTA TTATTTCAGT TGATGATGCA AAACGAGCCG TTGAAATTGG CGCAACCAGT ATTATTATAT CAAACCATGG TGGCAGACAA CTAGACTCTG CGCCAGCACC TATTGATATC ATTCAAGAAA TAAGAGCCGC CGTTGGTGAT GACATTGAAA TTATTGTTGA TGGTGGTATT CGTCGAGGTT CCGATATTAT CAAAGCGATA GCGTTAGGCG CAAATGTATG TTCTATTGGA CGTGCTTATG TTTACGGCTT AGCTGCAGGT GGACAAGCAG GTGTTGAGCA TGCCATCACC TTGTTAAAAT CTGAGGTTGA ACGGGACATG GCCTTACTCG GTTGTACTGA ATTATCTCAG TTAAATCCAA GCATGATCCG GGATCGACTT AGCTAA
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Protein sequence | MITKCFNIEN LHQLAKKRLP KAIFDYMAGG SDDEKALANN TSAFDRYQLI PNVLRDVRDI NIKSKVFGCE IEMPFYISPI GQSRFFHPDS DIAGVKAAAK MKTLFTLSTF SGKPLEEVAQ ATTSDKAFQV YVLTDKEQNK RLLDRCKKAG YKALVLTVDT IVAGNRERDL VNGLTIPPKL SLSSAVDFAC KPRWVFNYVT DKGRDLANLE SVPPMKDTAQ FLQYMKGLLE PNLTWQHAKD MIEYWGGKFA IKGIISVDDA KRAVEIGATS IIISNHGGRQ LDSAPAPIDI IQEIRAAVGD DIEIIVDGGI RRGSDIIKAI ALGANVCSIG RAYVYGLAAG GQAGVEHAIT LLKSEVERDM ALLGCTELSQ LNPSMIRDRL S
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