| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2053 |
|---|
| Symbol | |
|---|
| ID | 3519320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2131525 |
|---|
| End bp | 2133024 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637284513 |
|---|
| Product | aldehyde dehydrogenase family protein |
|---|
| Protein accession | YP_268781 |
|---|
| Protein GI | 71279196 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACT TAAATTCAGC CTATTGGCAA AAATTATCGC AAAATATTAA ATTTCGTAAC
CAGGCCTTTA TCAATGGTAC TTTTACTGAT AGCACGTCAA ATGAAAGCTA TCAAGTAATT
AATCCAGCGA CAGAGGAAGT ACTTGCATCT GTCACAGCTT GCAATTCACA AGATGTAGAT
AGTGCGGTAG CTTGCGCAAG AGAAACTTTT GAATCAGGTG TTTGGGCTGA TAAATCACCT
TCAGAGCGTA AAGCGGTTAT CTTAAAATTA GCGCAACTCA TCCAAGATAA TAAAGAAGAA
CTTGCTCTGC TTGAAACATT AGATATGGGC AAACCAGTGA TGGATGCGCT TAATATCGAT
ATCGGTGGCG CATCGGCTAT TCTAGCTTGG TATGGTGAAG CAGCAGATAA AATTAATGAT
GAAATAGCAC CAACAGGTCC AGGCTCACTT GCCACGATTA CAAAAGAAGC AATAGGTGTT
GTTGCTGCTA TTGTTCCATG GAACTTTCCT CTTGATTTAG CTATTTGGAA GTTAGGACCT
GCACTTGCTG CGGGTAATAG CGTCATCGTA AAACCAGCAG AACAGTCACC ACACTCTGTA
CTGCGTTTAG CTGAACTTGC TATTGAAGCA GGTGTACCTG CAGGCGTGTT TAATGTAGTA
ACGGGTCACG GCGCAGTTGT AGGTAAAGCC TTAGGTTTAC ATGAAGATAT TGATGTTCTT
ACTTTTACTG GCTCAACAGG AATAGGTAAA CTATTTTTAC AGTACAGCGC ACAATCAAAC
ATGAAAAGCG TTTGGTTAGA AACTGGCGGT AAAAGCCCTA ACCTTGTTTT TGCTGATTGC
GAAGATTTAG ACAAAGCTGC TGATGGCGCA GCCATGGGGA TTTTCTTTAA CCAAGGTGAA
GTTTGTTCTG CTAATTCTAG ATTGTTAGTT GAAAGCTCAA TTAAAGATGT CTTTGTAGAA
AAAATGATAA CCCGTGCCAA GCAAGTTATT ATGGGTCATC CGCTTAATAC TAATACCACT
ATGGGTCCTA TTGTTAGTGA TTTACAAGCG AGCCGAATCT TCTCAAAAAT TGAAAAAGCT
CAGCAAGAAG GTGCAACATT AGTTACTGGT GGTAAACGAG TAACAATTGA TGGATCGTCT
TTATATATTG AACCAACTAT TTTTGATAAC GTCGATAACA GCATGTCAAT TGCACAAGAT
GAAGTTTTTG GTCCTGTACT GTCAGTGATC AGCTTCGATA CCGAAGCTGA AGCTATAGCT
ATTGCCAATG ATACACCATA TGGTTTGGCA GCTTCCATTT GGACGGATAA TTTGAGCCGA
GCTCATCGAG TTGCCCGCAA GATTAAAGCC GGTACTATTT CAGTAAATAC TGTAGATGCT
TTAAGCCCAA TGACACCTTT TGGTGGCTAC AAACAATCGG GTATTGGACG AGATTTATCA
ATTCATGCCT TTGATAAATA TACAGAAACT AAAACCACTT GGATAAAATT TTCTGAATAA
|
|---|
| Protein sequence | MENLNSAYWQ KLSQNIKFRN QAFINGTFTD STSNESYQVI NPATEEVLAS VTACNSQDVD
SAVACARETF ESGVWADKSP SERKAVILKL AQLIQDNKEE LALLETLDMG KPVMDALNID
IGGASAILAW YGEAADKIND EIAPTGPGSL ATITKEAIGV VAAIVPWNFP LDLAIWKLGP
ALAAGNSVIV KPAEQSPHSV LRLAELAIEA GVPAGVFNVV TGHGAVVGKA LGLHEDIDVL
TFTGSTGIGK LFLQYSAQSN MKSVWLETGG KSPNLVFADC EDLDKAADGA AMGIFFNQGE
VCSANSRLLV ESSIKDVFVE KMITRAKQVI MGHPLNTNTT MGPIVSDLQA SRIFSKIEKA
QQEGATLVTG GKRVTIDGSS LYIEPTIFDN VDNSMSIAQD EVFGPVLSVI SFDTEAEAIA
IANDTPYGLA ASIWTDNLSR AHRVARKIKA GTISVNTVDA LSPMTPFGGY KQSGIGRDLS
IHAFDKYTET KTTWIKFSE
|
|---|
| |