Gene CPS_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2050 
Symbol 
ID3519912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2125636 
End bp2127750 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content37% 
IMG OID637284510 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_268778 
Protein GI71279453 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00581] molybdenum cofactor biosynthesis protein MoaC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.459277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTAA GTAAAAGACA TTCAATTCAA AAAAAAGTCA CTGTATTATT TATTAGTATT 
GTTTTGCTAT GTACTTTTGG CTTTGCAGTG CTGACCTCTC ACACATTATC AGCTTTATCT
GATGAGCAAA TATCGTCAAC TAAAAAATTA ATACAAAGCT CTGTTCTTAA ATCCATGAAT
GACGCAGGAA ATTTATCCAG TGAACGTATC AGCAAACTGC TCAAACAAAG CTTTGCACCC
GTGCTAGTTT TAGCTGAAAC CTTATCTAAA ACAGCTCAAC CAAGTACACC TTTCAACAGA
GATGTAGTAA GTAATTTAAA TCGTTATACC TTAGAAGCAA CGCCGACTAT TAGTTCGATT
TACACTCACT TTGAAATTGA TGGTTATGAT GGACTTGATA GCACTTTTGT TAATTTTGGA
CAACACTCAA CACCAACAGG GAGCTTAGAA GTCTATTGGA TAAAAGAGAA TGGGCAAGCA
AGCTTTTACT CGACAGATAA TTCAGCAGAT AAATATAACA GTGAAAAAGA CGACAATGGT
ATTCGTAAAT CAGAGTATTA CTTATGCAGT AAAGATTCAC TAAAACCTTG TGCGCTTGAC
CCTTATATGT ATGAGATAGA GCCTGGACGG GAAGAGTTAA TGACGACACT ATCTGCACCA
ATCATTGTAT CAAACCAATT TAGGGGGTTA GTCGGTGTTG ATATTAATTT ACCTGTCGTA
CAAAAATGGA TTATAGAACA AGCAAAATCG TTATTTGAAG GCAATGTATC TATCAGTTTA
TTCAGTCAAA AAAATATGAT TATTGCTTCA AGCCTTTACC CTGATAAATT GTCTAAAAAA
GCTAGTGATG CTAATTCAGA ACTTTCAGCG ATATTAAGAG CTCCCAAGAA CTCAATTATC
TCTGGCTCTG ACTGGCATGT TAAAGTGCCT GTTTTTATTA GTGAAGCAAA TGTGACATGG
ACTCTTCTTA TTTCTGTTCC TGAAAAAATA GCATTAGCCT CAGTGTTAGA AATGACAGAG
AAAGCGAATG AGTCCTATAA TAAAGCACTC ACTGAGCTTC TATTCTTTTC ACTCTTGTTC
TTATTATGCG CATTATTTTT TGCTATCTGG CTTGCGAGAT CAATAACCTC ACCTATCAAA
TTACTTTCTT TTTCGATTCA AGAGTTGGCA GAGCGTGAAG GCGATCTGAC CCAAAATGTA
ACGGTTGAAA GTCATGAAGA ATTAATACTC TTGGCAGCTG GGTTCAATAA TTTTATCAAA
AAGTTAGCTG AAATGATTAG CTCATCTAAA AAGTTCTCCA ATGAATTAGT CGATAAGTTT
GGTGAGCTAG AAAACATTGC TCATGAAGTT GAAAGTGACA CGCAAGAGCA ACAACTTAAT
TTAGATAGTA TTGCTACTGC GATGACTGAA ATGGCCACCA CGTCAGGTGA AGTTGCAAAG
CTTGCTGTAG AAACAGCAAA TGGTGGAAAG CATGCCAACT CACTTCTACA AGAAACTCAG
AATATTTTAG AAGCTAGTGT TCAGAATGTT CAGGAGCTTG AACAAAACAT CTCATTAACG
AGTAAGCAAA TGTCACAAGT TGCCGCTCAC AGTTCAGATA TAACAGGTAT TGTTGAAACA
ATTAGATCTA TTGCTGATCA AACCAATCTA CTCGCATTAA ATGCAGCGAT AGAGGCAGCA
AGAGCAGGAG AACAAGGCAG AGGCTTCGCT GTTGTTGCCG ATGAGGTTAG AAATTTAGCC
GCACGAACTC AAACATCGAC TCAGGATATC AGTAATTTAA TTGGAAACTT ACAGTCGGAT
GTCGATAAAG CCGTTGAAAC ACTCGATGCA AACAAGGAAT CGATTACCAG TACTGTTGAT
AAAACAAGTC TTAGCTTTGA ACAACTTTCC CAAACATTGG AAAGTATAAA GCTCATGAGT
GAAAGTACAG AACAAGTAGC AACAGCGGCC GAAGAGCAAA GCCAAGTTGC TGAGGATATA
AACATTCGAT TAGTTTCTGT ATCTGATAGT AGTACAGGAT TGGCTGAATT AGGACAACGA
TTACAAGAAA ATAGTGCTTA CTCTAAAGGA GTAGTTGAAC GGATAGAATT AGAGCTAAAT
CGACTAAAAT GCTAA
 
Protein sequence
MLLSKRHSIQ KKVTVLFISI VLLCTFGFAV LTSHTLSALS DEQISSTKKL IQSSVLKSMN 
DAGNLSSERI SKLLKQSFAP VLVLAETLSK TAQPSTPFNR DVVSNLNRYT LEATPTISSI
YTHFEIDGYD GLDSTFVNFG QHSTPTGSLE VYWIKENGQA SFYSTDNSAD KYNSEKDDNG
IRKSEYYLCS KDSLKPCALD PYMYEIEPGR EELMTTLSAP IIVSNQFRGL VGVDINLPVV
QKWIIEQAKS LFEGNVSISL FSQKNMIIAS SLYPDKLSKK ASDANSELSA ILRAPKNSII
SGSDWHVKVP VFISEANVTW TLLISVPEKI ALASVLEMTE KANESYNKAL TELLFFSLLF
LLCALFFAIW LARSITSPIK LLSFSIQELA EREGDLTQNV TVESHEELIL LAAGFNNFIK
KLAEMISSSK KFSNELVDKF GELENIAHEV ESDTQEQQLN LDSIATAMTE MATTSGEVAK
LAVETANGGK HANSLLQETQ NILEASVQNV QELEQNISLT SKQMSQVAAH SSDITGIVET
IRSIADQTNL LALNAAIEAA RAGEQGRGFA VVADEVRNLA ARTQTSTQDI SNLIGNLQSD
VDKAVETLDA NKESITSTVD KTSLSFEQLS QTLESIKLMS ESTEQVATAA EEQSQVAEDI
NIRLVSVSDS STGLAELGQR LQENSAYSKG VVERIELELN RLKC