| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2012 |
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| Symbol | dctB |
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| ID | 3522006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2083066 |
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| End bp | 2084901 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284474 |
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| Product | C4-dicarboxylate transport sensor protein |
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| Protein accession | YP_268742 |
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| Protein GI | 71281534 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCTATC AAGGACAATC AGAGCGTAAA AATTATATTG TCGCCACTGT TGCAGTGATT
GGCCTAATCC TGACTATTGA ACTGACCCAA ATGATAGGTA TGAGCAATGC CTATCAACAA
ATGCACCAAC AATCGAGTCA GCAGTTATCT AATTTAGTGG GTTACATTGA CAATATTCTC
GGTCGCTTTG ACAGAATCCC CAAAGTGTTA TCGAAACACC CCTTACTGTC GCAAGCCTTA
ATCTCACCTA ACGAACAATC AAAAATAACC AAACTCAATC AGTTATTAGC AGATATTAGA
ACGATGACTC AGGCGTCAGA TATTTACCTT ATTGATAAAA AGGGTATTAC TATTGGGGCC
AGCAATTGGC AATTGCCTAA TTCATTTGTT GGTATGAACT TTATGTTTAG ACCCTATTTT
CAAGATGCGC TAAAAGGTAA ACTTTCCCAT TACTATGCTG TAGGGTTAAG TAGTGGTAAG
CGGGGCTTTT ATTATGCTTA CCCTGTGGTA GTTGATGGTG TTATTGCCGG TGTTATTGCT
TTAAAAATAA GTATTGCAGA TATTGAAGAA CAGTATAAAA AAACGGTATT AAATGATAGC
TTTAACTTCT TAATCGTTGC ACCCCATGAT GTGGTCTTCA TTTCAGATAG ACCAGAATGG
CGGTTAAAAA CTATTGGTAA CTTATCTAAA GCAAAACAGC TTAATTTAAT TGCAGAAAAA
CGTTATACCG ATAAAGAGAT ATCCTCACTT AACGTGGAAG ATATCTCAAA TCACTATCTT
CCAAATGACC TTGGCAGCGA GTTATTAGAA GTTACTTCAA ATACAGGGTC TGAAGAAGTT
TTTGCGCTGA ATAAACTGAT GAAAACGGCT AATTGGCAAG TTCATTTGTG GAGCTCTGTA
GCACCAATGA AAAAGCAGCA AAACTTATTA ATCATCCTCA GTGCTAGTGG TTATTTATTG
ATGGTGTTTT TGCTGTTATT TACTAATGAA CGACTTAAAA ATGCGCGAAG ACTTAAGCAA
TCTCAACAGT TATTAGAAAA AAAAGTTAAA GAACGTACGT CTGACTTAAG TGCGAGTAAC
GTAAAATTAC ATGAGGAAAT AGCGCAACGT CAGCAAGCAC AAACTCAAAT GAATAAAATG
CGGGATGAAC TAATTCAATC AGAAAAGCTG GCGCTCATAG GTAGTATGTC AGCGAGTATT
AACCATGAAA TCAATCAACC GTTAACAGCC TTACGAAGCT ATTCAGAAAA TGCGTTGGCG
TATCAAGAAC GTAGTATGAC AGACAAAGTA AAAAACAACC TGTCACTCAT TATTGGTTTA
GTGGATCGAC TCAGTGATAT TGTCAGTCAA TTTAATAGCT TCTCTAAAAA AAGCACCGGT
GTTGCGACTG CCGTTGATGT TCAAATGAGT CTGATGGCGG CGATGAGTAT TGTAAAACAC
CAAGCTAAAG CCGCTAGAGT AGAATTTACT AGTAAACCTT GCTTAGAAAC TGTACATGTT
TATGGTGATG CTATTCGGTT TGAACAAGTG CTGGTTAACT TATTAAGTAA TGCCATACAA
GCGCTTAGTG AACAAGAACA CAAACAAATA ATTATTTCTG TGTCTGACGT TAAAGAACAC
GTTATCATTG AAATACGAGA CAACGGACCC GGTATTTTAG TTGATAATAT CGACAGAGTT
TTTGAAGCCT TTTTCACCAC GAAAGAAAAC TTTGGCTTAG GTTTAGGTTT ATCTATCTCG
CACCGAATTA TTGAGTCAAT GCAAGGTCAA CTTAACGTAA GTAACCACCC AGATGGCGGC
GCTATCTTTA CCATTAGCTT GCCTGTAAAC AGGTAA
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| Protein sequence | MVYQGQSERK NYIVATVAVI GLILTIELTQ MIGMSNAYQQ MHQQSSQQLS NLVGYIDNIL
GRFDRIPKVL SKHPLLSQAL ISPNEQSKIT KLNQLLADIR TMTQASDIYL IDKKGITIGA
SNWQLPNSFV GMNFMFRPYF QDALKGKLSH YYAVGLSSGK RGFYYAYPVV VDGVIAGVIA
LKISIADIEE QYKKTVLNDS FNFLIVAPHD VVFISDRPEW RLKTIGNLSK AKQLNLIAEK
RYTDKEISSL NVEDISNHYL PNDLGSELLE VTSNTGSEEV FALNKLMKTA NWQVHLWSSV
APMKKQQNLL IILSASGYLL MVFLLLFTNE RLKNARRLKQ SQQLLEKKVK ERTSDLSASN
VKLHEEIAQR QQAQTQMNKM RDELIQSEKL ALIGSMSASI NHEINQPLTA LRSYSENALA
YQERSMTDKV KNNLSLIIGL VDRLSDIVSQ FNSFSKKSTG VATAVDVQMS LMAAMSIVKH
QAKAARVEFT SKPCLETVHV YGDAIRFEQV LVNLLSNAIQ ALSEQEHKQI IISVSDVKEH
VIIEIRDNGP GILVDNIDRV FEAFFTTKEN FGLGLGLSIS HRIIESMQGQ LNVSNHPDGG
AIFTISLPVN R
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