Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1976 |
Symbol | deoB |
ID | 3519460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2043891 |
End bp | 2045105 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284438 |
Product | phosphopentomutase |
Protein accession | YP_268706 |
Protein GI | 71279024 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0351038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGTG CAATAATTAT AGTTATTGAT AGCTTGGGTA TCGGTTATTC TCCAGATGCT GTTGATTTTG GTGATGTGGG CGCAAATACG TTTGCTAACC TAGCTCGTGC TTATTATGAA GAAACAGGTA AAGAGATTTT CTTACCCAAC TTATCGGCAC TTGGAATGAT AAAGGCTTGT GAACAAGCAT CTAATCAAAC ATTTCCTTAT CAGGGTCAAG AACCAAGTAA AGGTGCTTAT GGTTTTGCAC AAGAAATAAG TACTGGTAAA GATACGCCCA GTGGTCACTG GGAGATGGCA GGCGTACCTG TACTTTTTGA TTGGGGATAT TTTACCGATA AAAACAGTAG CTTTCCCACA TCATTAATTG ACGATATTAA TCGTGAAACG GGTTTTGATG GCATATTAGG CAATTGTCAT GCTTCAGGTA CCGAAATTCT TACCCGTTTA GGACAAGAGC ATATTGAAAC AGGTTTACCG ATTTGTTATA CCTCGGCCGA TAGCGTTTTT CAAATAGCTG CGCATGAAGA ACATTTTGGT TTAGATAACC TCTATAAATA CTGTGAAACG GTTCGAGAGT TACTTGGTGA TTTAAATATA GGACGTGTTA TTGCTAGACC CTTTGTAGGA GATAGTGCTG ATAACTTTGC TAGAACAGGT AACCGTAGAG ATTACTCAGT GTTACCGCCA GCTCCTACGG TACTTGATAA AATATCACAG GAAGGAACTC ATGTTATCAG TGTTGGTAAA ATTGCTGATA TTTTCGCTCA TCAAGGCATT GATGAAAAAA CAAAAGCGAC TGGGCTCAAT GCACTTTTTG ATGCCACTTT GGATCATATT AATACCGCAC AAGACAATTC ACTCATTTTC ACTAATTTGG TTAATTTTGA TCAAGATTTT GGTCATAGAC GCGATGCTAT CGGTTATGCA AAAGAGCTTG AAGCACTAGA TGTTCGTATA CCTGAGCTCT TTCATGCGAT GTCTGCGGAG GATGTACTAT TCTTAACCGC TGATCATGGT TGTGATCCAA CATGGCCTGG TACTGAGCAT ACTCGAGAGT ATGTACCTAT TATTGCTTAT CATCATCAGA TTGACTCTGT AAACCTTGGT AACCGTAAGA CGTTCGCTGA TTTAGGACAA AGTGTCGCCG AGTTATTTAA CGTAGAAGCA ATGGACTACG GCACAAGCTT TCTGTCAGAG ATATACAGTA AGTAA
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Protein sequence | MARAIIIVID SLGIGYSPDA VDFGDVGANT FANLARAYYE ETGKEIFLPN LSALGMIKAC EQASNQTFPY QGQEPSKGAY GFAQEISTGK DTPSGHWEMA GVPVLFDWGY FTDKNSSFPT SLIDDINRET GFDGILGNCH ASGTEILTRL GQEHIETGLP ICYTSADSVF QIAAHEEHFG LDNLYKYCET VRELLGDLNI GRVIARPFVG DSADNFARTG NRRDYSVLPP APTVLDKISQ EGTHVISVGK IADIFAHQGI DEKTKATGLN ALFDATLDHI NTAQDNSLIF TNLVNFDQDF GHRRDAIGYA KELEALDVRI PELFHAMSAE DVLFLTADHG CDPTWPGTEH TREYVPIIAY HHQIDSVNLG NRKTFADLGQ SVAELFNVEA MDYGTSFLSE IYSK
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