Gene CPS_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1971 
Symboltdk 
ID3520002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp2040196 
End bp2040774 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content39% 
IMG OID637284433 
Productthymidine kinase 
Protein accessionYP_268701 
Protein GI71279543 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.265516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAC TTTATTTTTA TTACTCATCG ATGAATGCGG GAAAATCAAC TCACCTTTTA 
CAATCATCTT ATAACTATCA AGAACGTGGC TTAGTCACCG CTATTTATAC TGCGAAAATT 
GATGATAGAT TTGCAAAAGG CAAGGTTGCT TCACGATTAG GTATTGATGC AGACGCTTTT 
TTATTCGACG AAAAGATCAA TCTATTTAAA GACGTTGACC AGAAACATCA AGCTGAAAAA 
ATTGATTGTG TACTAATAGA CGAAGCACAG TTTTTGTCAA CTGAACAAGT TAAACAGCTT 
ACTGATATTG TCGACCTATT GCATATTCCT GTATTGGCTT ATGGCATACG CACTGACTTT 
TTAGGACAAA CCTTCTCAGG TAGTGCCGCT TTGCTCGCTT GGGCTGACAA ATTGGTTGAA 
TTAAAAACGA TATGTCACTG TGGGCGAAAA GCTAACTTTG TCATCAGACA AGATGCTAAC 
GGTAAAGCGG TACAAAATGG TGAGCAAGTA GAGGTTGGTG GCAATGAACG TTATGAGCCC 
CTTTGTCGTG CTCATTTTAA GCAACTCGTC TGGCTATAA
 
Protein sequence
MAQLYFYYSS MNAGKSTHLL QSSYNYQERG LVTAIYTAKI DDRFAKGKVA SRLGIDADAF 
LFDEKINLFK DVDQKHQAEK IDCVLIDEAQ FLSTEQVKQL TDIVDLLHIP VLAYGIRTDF 
LGQTFSGSAA LLAWADKLVE LKTICHCGRK ANFVIRQDAN GKAVQNGEQV EVGGNERYEP 
LCRAHFKQLV WL