Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1941 |
Symbol | |
ID | 3520007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2003968 |
End bp | 2004687 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637284403 |
Product | cytochrome b561 family protein |
Protein accession | YP_268671 |
Protein GI | 71279548 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00760577 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCA AAAGAGAACA GGTTTTCGTA TGGAGTGGTA AAATTAGACT TTTTCATTGG ATAAATGTTA TTGCCATTTT ATTGCTGATT GTTATCGGTG TTGTCATATT AAATGGCAAA CTTTTTGGTG TAAGCACTGA CGGAAAAATA TTATTAAAAA CAATACACGT GATTGTTGGT TATGTTTTTG CTACAAATTT AATTTTCCGT TTAATCATTG CTTTTATAGG TAAAACATAT GAAAAATGGG GCAAGATGTT ACCTTTTAAC AAAGGTTTTA CTGAGGAGTT AATTGAGTTT ACCCAACAAA AAAGATTAAC GTACAAGGGG CATAACCCAG CAGGTAAACT GATGGTATTA GCGCTGTTAT CATTCATGAG TGTTCAAATG ATTTCAGGCC TTGTCATCGC CGGTACTGAT ATTTATTATC CCCCCTTTGG TAACTATTTC ATCCAGAGCA TAGCTATTGA TAAAGACAAT TTAGCGGTGA TAAAACCTTA TTCAAAAGAA AATATCGATG AAGCCTCTTA TCAAGCAATG AGAGATTTTC GAAAACCCTT TATTACCGCG CATGTGTATT CTTTTTACTG TCTTTTATTT CTCATTCCAT TGCATATTAT CGGAGTCATT GTTGCTGAAA GACGAGAACG AAGCGCTATT GTTTCTGCGA TGTTCAATGG TTATAAGTAT CTCCCTAAAG ATGAGCCAAC TGATCACTAG
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Protein sequence | MNIKREQVFV WSGKIRLFHW INVIAILLLI VIGVVILNGK LFGVSTDGKI LLKTIHVIVG YVFATNLIFR LIIAFIGKTY EKWGKMLPFN KGFTEELIEF TQQKRLTYKG HNPAGKLMVL ALLSFMSVQM ISGLVIAGTD IYYPPFGNYF IQSIAIDKDN LAVIKPYSKE NIDEASYQAM RDFRKPFITA HVYSFYCLLF LIPLHIIGVI VAERRERSAI VSAMFNGYKY LPKDEPTDH
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