| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1875 |
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| Symbol | |
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| ID | 3518335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1930718 |
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| End bp | 1932022 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284337 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_268605 |
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| Protein GI | 71277750 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTACACC AAACTATTCA AGCAATTATC GAAGCTGTAG AGAAACCAGC AATATTCATT
ACCCATGATT ACTCAATTGA AGCAGTTAAT CAGGCTTATC GTGATACCTA TACGACAGAA
GTAATGCTAG GGAAAAGTAA GTGTTACGGG GTATCACATA ATTTCACTAA ACCTTGTGAC
CAAAAAGGCG AAGCCTGTCC CCTTTCATCA TGTAAAGAAA CAGGGAAAAA CAGCTCTGCT
TTGCACATTC ATAAAACAGG CTCTGGTGAT ATTTATTGTA ATATTCTGAT GAAACCTGTT
AAAGACAACA ACGGCATGAC CATTGGCTTT TTAGAAATAC TAGAAAAGGT CGATTTTGCA
AGTAGTGTTA GTAGCGATCT AAAATTAATT GGTAAAAGTG AGCCGTTTCA AGAGCTCCTC
AAAATGATCA CGCGTAGTGC AAAAAGTAAT ATCAGCATAT TATTACAAGG TGAGACCGGA
ACAGGTAAAG AACTCGCGGC TTTATCAATA CATCAAGCAA GTAAGCGAGC TGATCAGCCT
TTTATAGAAG TTGAATGTAC CGGGCTCAAC GAATCCTTAT TTGAATCAGA GTTATTTGGC
CATGAAAAAG GCGCGTTTAC GGGCGCAAAC ACCAGTAAAA AAGGTTTAGT GTGTATGGCA
AATGGTGGCA CCTTATTTTT AGATGAAATA GGCGACGTGC CACTGAATTT GCAAGTAAAA
TTATTACGAT TACTTGAAAC AGGTCATTAT CGACGTGTCG GTAGTGTTGA AAAGCAAATG
GCCAACTTTC GGCTAATTTG TGCCAGTCAT AAGAATTTAG AAAAGATGGT TGAAGACGGT
GAATTTAGAG AAGATTTATA TTACCGGATT GCCGCTTTTC CCATTAGTTT GCCAACACTA
AGACAAAGAA AGTCTGATGT TTCGTTATTA GCAGAGCATT TATTATCAAA AAGTGAATTT
TCCTCGAAAA AGTTTACCTC TGAAGCCCTA GTCGCATTAT CTCATTATCA TTACCCAGGT
AATGTCAGAG AGCTTAAAAA CATAGTGCAA CGAAGTGCCT TATTAAGTGA TGATGACTTA
ATAAGCATTG AACACTTACC CAAAAATCTT GTCGGTTTAA ACGAGATAGA AACTCACTCA
AGCAATCTGC TATCAAACGA AAAAGAGCAC ATAACCAAAT TGCTTAACCA ATATGGTAAC
CAACCCAAAA CCATCGCTGA TAACTTAGAA GTTAGCGTTA GAACCTTATA CAGAAAACTG
CAAAAGCATC AGTTAAACAT CAAAGACTTT TCTTCGACTA AATAA
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| Protein sequence | MVHQTIQAII EAVEKPAIFI THDYSIEAVN QAYRDTYTTE VMLGKSKCYG VSHNFTKPCD
QKGEACPLSS CKETGKNSSA LHIHKTGSGD IYCNILMKPV KDNNGMTIGF LEILEKVDFA
SSVSSDLKLI GKSEPFQELL KMITRSAKSN ISILLQGETG TGKELAALSI HQASKRADQP
FIEVECTGLN ESLFESELFG HEKGAFTGAN TSKKGLVCMA NGGTLFLDEI GDVPLNLQVK
LLRLLETGHY RRVGSVEKQM ANFRLICASH KNLEKMVEDG EFREDLYYRI AAFPISLPTL
RQRKSDVSLL AEHLLSKSEF SSKKFTSEAL VALSHYHYPG NVRELKNIVQ RSALLSDDDL
ISIEHLPKNL VGLNEIETHS SNLLSNEKEH ITKLLNQYGN QPKTIADNLE VSVRTLYRKL
QKHQLNIKDF SSTK
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