| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1839 |
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| Symbol | |
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| ID | 3519444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1889605 |
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| End bp | 1891005 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284301 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_268569 |
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| Protein GI | 71279047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.594597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATG ATGTAGTTTT ACTGGCAGTT TTAATATTAG TTATAAGCTT ATCAAGTAAG
CCGATTTTGG CTCAGACATT CACTTTTTCC CAAGCATGGA AAACTGTACT GCAAGAAAGT
GACGCACTCG CGGCAGAAAA ACAAAATATT GAACGATCTC AATATTTACA GGAAGCCGCA
AGTGACCTGT TATTACCCAG TATTTCTATA GGGGCAAACT ACACGCGTTT AGACCATGCC
GTTAGAGTTA GACCTTCTGA AGTGATAGCG AGCATGCCTA TTGATAGTAT CAATGAAGCC
TTTGGTATCA CGACAGATAA CTTAGATAGC TTTTTTACTT CGACTTTATC TGAACGTGAT
ATTTTCACTA GTTCAATCCG TGCTTTATGG CCTGTTTACA CAGGAGGACG TGTCAGTGCT
GTTCAAGGAA TTGCTAAAGC CCAAAATGAT GAAGCAAGTC ATTTACTGAC GATGAAACAG
CTAGAAAAAT TTGAAGACTT AGTGAAGTAT TATTTTGCAG TAGTACTTTC TGAGCAAGTA
CTTCAAACGA GAATAGATGT AGAGCAAGGT TTAAAGACGC ACTATGAAAA TGCTGTAAAA
CTAGAAGAAC AAGGGCAAAT AAATAAACTA GAACGTTTAC AAGCACAGGT TTCATTAGAT
AAATCACAAG TAGAGCGAAA AAAATCACTT CGAGATGCTG AAATCGCACA AATCGCCTTA
GGTCGATTAC TTAAAACCCG AGCAAAAATC ACGCCTACAA CGACACTATT CATTAATGAA
TCATTACCTC AAATGTCTAA CTATTTAGAT AAATCACTAG CTGATTTCCC AGCACTAAAA
ATGCTTGATT CTAAAGAGAA ACAAGCAGTC GGATTAATCG AGATAGAGAA AGGTAAATAT
TATCCGGAAG TTTATCTTTA TGGAAACTAT AACTTGTATG AGGAAGATAA CTTAGCTTCT
CAAATCGCAC CTGATTGGGA AATCGGGGTT GGGGTCAAGA TCCCTATTCT CGATACCTCT
GGTCGTTCAG GAAAAATGAA AGCAGCGCAT AGTTCAGTAA TGCAAATAAA ATATCTTAAA
GCACAAGCCG TACAAGATTT ATCTGTTTTG GTGGAAAAAG CCTACCGAGA AGCAAATCAA
TCTCTAGAAG AATATCAAGG TCTTGCATCA AGTTTAGCCT TAGCAAATGA AAACTTAAGG
TTACGCACTA AAGCCTTTAA ACAGGGGGTA TCAACATCAA TAGATGTCGT GGATGCAGAA
TTATTTGTTG CGAGTATAAG AACCCAACGC TTTGTTGCCG CGTATCAATA CATGTTATCT
CTTTCTAAGC TACTCGCATT AAGCGTAGAC ATTCATAACT TTAAACATTA TCAATCTTAT
CAAGGTATAG AGGTTAAATA G
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| Protein sequence | MKHDVVLLAV LILVISLSSK PILAQTFTFS QAWKTVLQES DALAAEKQNI ERSQYLQEAA
SDLLLPSISI GANYTRLDHA VRVRPSEVIA SMPIDSINEA FGITTDNLDS FFTSTLSERD
IFTSSIRALW PVYTGGRVSA VQGIAKAQND EASHLLTMKQ LEKFEDLVKY YFAVVLSEQV
LQTRIDVEQG LKTHYENAVK LEEQGQINKL ERLQAQVSLD KSQVERKKSL RDAEIAQIAL
GRLLKTRAKI TPTTTLFINE SLPQMSNYLD KSLADFPALK MLDSKEKQAV GLIEIEKGKY
YPEVYLYGNY NLYEEDNLAS QIAPDWEIGV GVKIPILDTS GRSGKMKAAH SSVMQIKYLK
AQAVQDLSVL VEKAYREANQ SLEEYQGLAS SLALANENLR LRTKAFKQGV STSIDVVDAE
LFVASIRTQR FVAAYQYMLS LSKLLALSVD IHNFKHYQSY QGIEVK
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