| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1832 |
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| Symbol | torC |
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| ID | 3520100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1881113 |
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| End bp | 1882291 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284294 |
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| Product | cytochrome c-type protein TorC |
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| Protein accession | YP_268562 |
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| Protein GI | 71279641 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.826575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGC TCAAAAACCT TTGGCAAACA CTTAATACGC CAGCCAAATA CTTAACCTTA
GGCTCCATCA GTTTAACAGC TTTCATTATG GGCGTTGTTT TTTGGGGTGG ATTCAACACC
GCTTTAGAGG CAACCAATAC TGAAGAATTC TGTATTGGTT GTCATAGTAT GGAAAGTAAA
CCTTATCAAG AATTACAAAA AACAGTGCAT TGGTCTAATC ACTCTGGCGT ACGTGCCACT
TGCCCAGACT GTCATGTTCC ACATAGCTGG GGTCGTAAAA TTGCTAGAAA AATGGAAGCA
TCCAGTGATG TTTGGGGTTG GGTTTTTAAC ACCGTTAACA CCAGTGAAAA ATTCGAAGAT
AAACGTTTAG AAATGGCGTC ACGTGAATGG GCTCGCTTCG AGAGAGATGA CTCGTTGGCT
TGTAAGAATT GTCACAACTA TGACTCGATG AAATGGGACA CCATGTCTAA GTTGGCGCAA
AAACAAATGA AGCGTGCCGC CGAAAAAGAT CAAAGCTGTG TTGATTGCCA CAAAGGGATC
GCACACATAT TACCCGATAT GGGAACCGCA AGAGCACCGC AGTTAATTGC TGAAGTAGGC
ACTGGACCAA GTAAATTCAC CAATGAACAA TACTACTTCA GTGCATTGAC CAAGCCACTA
TTTTTTAGCG CTAAAGGTGA TGTAGAAGCA GGCACGTTAA ATGTCGCAAC CAAGGTTAAA
ATATTAGAGA GCAAAGAGAA CAGAGTTAAA GTTTCAATTA GTGGTTGGCG TAAACAAATT
GGTGCTGGCC GAGTTATTTA TTATGACTTT GGTATCAATA TGTTAACAGC ACAATTATCA
AAAGAAGCGG CAAAAACTGA AGGTGTCATC AATGGCTTTG AAGAAAAAGA AGACGAGATG
ACCGGTTTGA AATGGCAACG TGTTGAAACA ACATTATGGA CTGATGCTGA ATACCTAATT
ACCGAGCAAC AGCCACTTTG GGATTATGCT CGTACAACCT TTAGAAGCAG CTGTAGTGTT
TGCCACACGC AACCAGACGA AGCTCACTTT GACGCAAATA CTTGGCCAGG CATGTTCCAA
GGCATGATAG CTTTTGTCAA CATGGACCAA GATACCCAAG CATTAGTACA AAAATATCTA
CAACAACATT CATCAACTTT TGTTAAAAAA GAACATTAA
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| Protein sequence | MKWLKNLWQT LNTPAKYLTL GSISLTAFIM GVVFWGGFNT ALEATNTEEF CIGCHSMESK
PYQELQKTVH WSNHSGVRAT CPDCHVPHSW GRKIARKMEA SSDVWGWVFN TVNTSEKFED
KRLEMASREW ARFERDDSLA CKNCHNYDSM KWDTMSKLAQ KQMKRAAEKD QSCVDCHKGI
AHILPDMGTA RAPQLIAEVG TGPSKFTNEQ YYFSALTKPL FFSAKGDVEA GTLNVATKVK
ILESKENRVK VSISGWRKQI GAGRVIYYDF GINMLTAQLS KEAAKTEGVI NGFEEKEDEM
TGLKWQRVET TLWTDAEYLI TEQQPLWDYA RTTFRSSCSV CHTQPDEAHF DANTWPGMFQ
GMIAFVNMDQ DTQALVQKYL QQHSSTFVKK EH
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