Gene CPS_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1681 
Symbol 
ID3522945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp1726132 
End bp1726728 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content37% 
IMG OID637284144 
ProductTetR family transcriptional regulator 
Protein accessionYP_268419 
Protein GI71282470 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAG CAGGCCGACA TCGCAGCTTT GATAAAGACA AAACACTTGA AAAAGCCATG 
TTGGTTTTTT GGAAAAATGG CTATCCAGGC ACCTCGTTAA CAGATCTAAC AAATGCAATG 
GGTATTAACA AGTCGAGCCT GTATGCTGCT TTTGGCAATA AAGAAAATTT ATTCAATCAA 
GCTATTGAGT ATTATTTAAA TAAACATGGT GTAGTGCACT TAGCTGAGCT TTTTAAAACA 
GAACTAAGCT TAAAGGAACG AGTCAAAAAC TACTTATTCT CGATAGCGAA CATGTTAACA 
AACCCAGACT TACCTAAAGG TTGCCTGATT AGTCAATCTA CTTCAGAAAT AGCGGGCTGT 
TGTTTACCTG AAAATTCGGC AATGAATATT AATGGCATTA ATCAGCAAAC CCTATTGACG 
TTGACTGAGT TTTTTGAAGA ACAACAGGCA GGGAGGGGGA TAGATGAAAA CTCGCCAAAA 
GCAATAGCAA ATTATCTTTT AACACTGCAA TTCGGTTTAG CTATTTCTGC GAGAAATGGG 
AGTAACTTAG AAGATCTGAA AGAGACTATA AATGTGTCTC TCAGTCTTTT TAATTAA
 
Protein sequence
MMTAGRHRSF DKDKTLEKAM LVFWKNGYPG TSLTDLTNAM GINKSSLYAA FGNKENLFNQ 
AIEYYLNKHG VVHLAELFKT ELSLKERVKN YLFSIANMLT NPDLPKGCLI SQSTSEIAGC 
CLPENSAMNI NGINQQTLLT LTEFFEEQQA GRGIDENSPK AIANYLLTLQ FGLAISARNG 
SNLEDLKETI NVSLSLFN