Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1590 |
Symbol | |
ID | 3522084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1635005 |
End bp | 1636372 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284053 |
Product | DEAD-box ATP dependent DNA helicase |
Protein accession | YP_268332 |
Protein GI | 71281612 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTTG ATTCAATTGG CTTATCAGCG GATTTATTAA AAGCGGTTAA GGCGTGTGGT TATAAGAATT TAACCCCTAT TCAACAAGAA GCAATTCCAG TTATTCGCCA AGGCGTTGAC CTTTTAGCAA GCGCACAAAC AGGTACAGGT AAAACAGCTG CTTTTAGCTT ACCTATTTTA GATGCAATTG CTAAAGCCAA TCATGCCGCC AAGAGTTCGA CTACTTCTAC AGATGAAAAC TCTGCAGAAG AAAAAAGTGC ATCAGGACAA GCAATTCGAG CGTTAATATT GACGCCTACT CGTGAACTTG CCAATCAAGT AGCTGATAAC ATCAAACAGT TTAGCCAATA CCTACCGATA AAAAGTGGTG TGGTTTATGG TGGCGGTAAA ATGGCATCAC AAACAAAGAT GCTAAAACAA GGCCTTGATG TGTTAGTAGC AACACCGGGT CGTTTATTAG AGCACTTAGC TCTACGCAAT GTTGATTTAT CACAAGTGAA ATTTCTTGTA CTTGATGAAG CTGATCGCAT GTTAGACATG GGATTTTTAA CGGATATTGA AAAATTATTG CTAGCTGTTA AACATAAGCA TCAAACGTTG ATGTTTTCTG CAACTTTTTC AGACCGCGTA AAGTCGTTAG CAAATCAGTT ATTGAAATCA CCAAAAACAA TCAGTGTTTC TAAAGAAAAC ACGACTTCGG GTAAAATAAA GCAAGCCGTT TATTGGGTTA CCGAAGAACG TAAGCGAGAA TTACTTTCAG AGCTTATTGG TGTTAATAAT TGGCAGCAAG TACTGGTGTT TGCCGGAACA AAAGAAAGTG CAAATACGTT AGCAAAAGAA TTAAAGCTTG ACGGAATAAA AGCGGCGTTA TGTCACGGCG ATAAAACTCA AGGCGCAAGA AATAAAGCAT TAGAGCAGTT TAGTGAAGGT AAAGTGCGCG TATTAGTTGC AACAGACGTT GCAGCTCGAG GACTCGATAT ACCCGATCTT GCTTTTGTCG TTAATTTTCA CTTACCATTT TTACCTGAAG ATTATGTCCA CCGTGTTGGT CGTACGGGTA GAGCGGGTAA ATCAGGTACG GCAATTTCTT TAGTAAGCCC TAAAGATGAG CGCTTTTTAG AAAACATAGA GCAATTAATT GAACGTAAGT TTGAACGTAT TGTAGCTCCT GGTTATGAGT TTAACCGCCT AGAAGCTAGT GAATACCAAG AAGCAACGGT AAAGCGCGAC AGTAAAAACA GGTATCGTGC AGCCCAAGAA AAGAATCAAA ATTTAGCGAA AAAAGATGTG AAAATTAAAA GTTTAAGTAA AAATAAAACG GCAAGAACGA ACAGTAAATA CAATAATAAA ATTCAGAAAA AACGTTAA
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Protein sequence | MSVDSIGLSA DLLKAVKACG YKNLTPIQQE AIPVIRQGVD LLASAQTGTG KTAAFSLPIL DAIAKANHAA KSSTTSTDEN SAEEKSASGQ AIRALILTPT RELANQVADN IKQFSQYLPI KSGVVYGGGK MASQTKMLKQ GLDVLVATPG RLLEHLALRN VDLSQVKFLV LDEADRMLDM GFLTDIEKLL LAVKHKHQTL MFSATFSDRV KSLANQLLKS PKTISVSKEN TTSGKIKQAV YWVTEERKRE LLSELIGVNN WQQVLVFAGT KESANTLAKE LKLDGIKAAL CHGDKTQGAR NKALEQFSEG KVRVLVATDV AARGLDIPDL AFVVNFHLPF LPEDYVHRVG RTGRAGKSGT AISLVSPKDE RFLENIEQLI ERKFERIVAP GYEFNRLEAS EYQEATVKRD SKNRYRAAQE KNQNLAKKDV KIKSLSKNKT ARTNSKYNNK IQKKR
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