Gene CPS_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1586 
Symbol 
ID3521748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp1633737 
End bp1634384 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content38% 
IMG OID637284049 
ProductTetR family transcriptional regulator 
Protein accessionYP_268328 
Protein GI71281277 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.377059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCA AAAATAAAAT ATTAGATGCC GCCGATGTAC TTTTTGCCAA TAAAGGCTTT 
AATGGTACGT CCCTAAGAGA AATTACGAGT CAGGCTAATG TCAATTTAGC GGCAGTAAAC 
TATCATTTTG GCTCTAAAAA AGAGTTAATT AAAGCGGTTA TGTCTCGCTA TATGGATGAA 
CTATCTCCTC GATTGGAGTC TGCACTGTCA CTCATTTGCC AAGCTGAGCT TAAACCAACT 
TTGCATGAAG TGTTTTCTGC TTTTATAGGG CCACTTTTAC ACCTTAATGA ATTTAAAGAA 
AACGGTACCA GTACCTTTTT GCAATTATTA GGGCGCGGTT ATACCGACAG CCAAGGCTTT 
TTACGTTGGT TTTTAACAAC TCAATATCCT GATGTTTTTA CTAACTTTAC CAAAGCCGTT 
AACATTGCTT ACCCTGAATT AAGTGCAGAA GAAATATTTT GGCGATTGCA TTTTACTATG 
GGCACTATAG TTTTTACCAT GTCATCAAGT GAAGCTTTGA TTGATATTGC TCAAAATGAT 
TTCGACAATA AGTTAGATAT AGCGGGTGTT ATCGAGCGAG TTATTCCTTA TGTTGCTGCA 
GGGGTTGGTG CGCCAATTAC TAAAACCGAA CCATTATCTC TAGTTTGA
 
Protein sequence
MSTKNKILDA ADVLFANKGF NGTSLREITS QANVNLAAVN YHFGSKKELI KAVMSRYMDE 
LSPRLESALS LICQAELKPT LHEVFSAFIG PLLHLNEFKE NGTSTFLQLL GRGYTDSQGF 
LRWFLTTQYP DVFTNFTKAV NIAYPELSAE EIFWRLHFTM GTIVFTMSSS EALIDIAQND 
FDNKLDIAGV IERVIPYVAA GVGAPITKTE PLSLV