Gene CPS_1580 details

Gene Information

• Locus tag: CPS_1580
• Symbol: seqA
• ID: 3519448
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1624503
• End bp: 1625105
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637284043
• Product: replication initiation regulator SeqA
• Protein accession: YP_268322
• Protein GI: 71279051
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3057] Negative regulator of replication initiationR

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACA TCGAAATAGA TGAAGAGCTT TACCAATATA TTGCCACTAA TACTCAGTTT 
ATTGGTGAGA GTGCTTCTGC CATTTTACGT CGTTTGCTAA ATTTGGGTGT CGAAGCCAAA 
CTTGAAACCG TTACCGTTAA TGAACCTTCA GATGTGGTTG AAGTAAATAT TCTTCCTGAG 
TCTGAAGAGA AGGCAGTGAA AATTGAAACT GCTGAGGTTA AAGAACCAAA AAGTAAAGCT 
GTTGTTAAGG TTACCGCTGA GAGCCATGAA ACAGTGTTTA ACTTTATCAA TAAAGAAGAG 
TTGGCAATGC AGCGTGGTGC TGTGGGACGG TTTTTATTAA TTCTTGCCGC ATTATATCGT 
GCTCATCCAG ACCAGTTTGG TGTAGTAACA GATATAAGTG GTAGAGATCG CTTATATTTT 
GCTAATAGTG AAAATAAATT AGCAGAAAGT GGCAGTAGTA CTAAGCCTCG CCAAATACCA 
GAAAGTCCAT TTTGGGTCAT AACCAATTCT AACACCACAC GTAAAAAAAT GATGTTAACT 
AAAGCCTCAA TCTCATTGGG TTATAGTGAC AGTGATGTAG AAAAAATTCG TGAGTTACTT 
TAG 

 

Protein sequence

MKNIEIDEEL YQYIATNTQF IGESASAILR RLLNLGVEAK LETVTVNEPS DVVEVNILPE 
SEEKAVKIET AEVKEPKSKA VVKVTAESHE TVFNFINKEE LAMQRGAVGR FLLILAALYR 
AHPDQFGVVT DISGRDRLYF ANSENKLAES GSSTKPRQIP ESPFWVITNS NTTRKKMMLT 
KASISLGYSD SDVEKIRELL