Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1573 |
Symbol | |
ID | 3519174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1619427 |
End bp | 1620653 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284036 |
Product | serine/threonine transporter SstT |
Protein accession | YP_268315 |
Protein GI | 71278216 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3633] Na+/serine symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCG AAAAACCCCA AAACGAATCT TTTATTCAAA AAATAAAGTC AACTAGTTTG GTTAGCCAAA TAATTGTCGC TATTATTTTA GCTAGTTTAC TAGCTGTAAT ATCACCCGAG TCAGCTAAAG CATTTGGTAT GCTCGGCAGC TTATTTGTTA ACGCCTTAAA AGCAGTTGCC CCTATTCTGG TGTTAGTATT AGTTACCTCA GCGATAGCTA ATCAGAAAAT GGATAGCAGT GCTGAGTTAA AACCTATTGT TGGCTTATAC TTTTTAGGTA CCTTAAGTGC CGCTTTGGTT GCCGTATTAT TAAGTTTTGC TTTTCCCACA GAGCTTACCT TAGATCTTGC TGGAGCGACT GCAAATCCTC CGCAAAAATT AACCGAAGTA TTGGCTACAC TCGCTTTTAA AGTGGTTGAA AATCCTGTGA CGGCAGTTGC TAGTGGTAAC TTTATAGCTG TGCTTGCTTG GGGGTTAGGC TTAGGCTTTT CATTAAAGCA TGCAAGTGAA TCTAGCAAGG GGATGGTACA TGATTTAAGC GAAGCTATTT CAAGTGTTGT GCGTATAGTA ATACGTTTTG CTCCACTAGG TATCTTTGGC TTAGTTGCAA ATACAATTGC GACTACGGGT TTTAGTGCTT TGGGCGAATA TAGTCATTTG GTAGCAGTAC TACTTAGTGC CATGTTAATT ATCGCCTTGC TAGTTAACCC TTTAATTGTG TTTATCATCA CTAAGAAAAA TCCTTATCCT TTAGTTTTCA CTTGTCTTAA AGAATCTGGT ATTACCGCTT TTTTCACCCG TAGCTCAGCC GCAAACATTC CCGTGAATAT GGCCTTATGT AAGAAATTAG ATTTACATGA AGATACCTAC TCAGTTTCGA TCCCACTAGG TGCCACCATC AACATGGCCG GTGCAGCAAT TACCATTACC GTTTTAACTT TAGCTGCGGC CTACAGCTTA AATATTGAAG TGAGTTTTGC GACAGCAATT TTATTGTCTG TGGTAGCCTC CATTTCAGCT TGTGGTGCTT CTGGTGTGGC TGGTGGCTCA CTATTACTTA TTCCATTGGC TTGTAGCTTA TTTGGTATTA ATAATGATGT CGCTATGCAG GTTGTTGCTA TTGGCTTTAT TATTGGCGTT ATTCAAGACT CGGCAGAGAC GGCTTTAAAT AGCTCTACTG ATGTTGTATT TTCAGCGGCA GCATCACACC ATATAACTAA AGAGTAA
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Protein sequence | MTSEKPQNES FIQKIKSTSL VSQIIVAIIL ASLLAVISPE SAKAFGMLGS LFVNALKAVA PILVLVLVTS AIANQKMDSS AELKPIVGLY FLGTLSAALV AVLLSFAFPT ELTLDLAGAT ANPPQKLTEV LATLAFKVVE NPVTAVASGN FIAVLAWGLG LGFSLKHASE SSKGMVHDLS EAISSVVRIV IRFAPLGIFG LVANTIATTG FSALGEYSHL VAVLLSAMLI IALLVNPLIV FIITKKNPYP LVFTCLKESG ITAFFTRSSA ANIPVNMALC KKLDLHEDTY SVSIPLGATI NMAGAAITIT VLTLAAAYSL NIEVSFATAI LLSVVASISA CGASGVAGGS LLLIPLACSL FGINNDVAMQ VVAIGFIIGV IQDSAETALN SSTDVVFSAA ASHHITKE
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