Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1561 |
Symbol | |
ID | 3522056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1605425 |
End bp | 1607878 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284024 |
Product | OMP85 family outer membrane protein |
Protein accession | YP_268303 |
Protein GI | 71281584 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.347163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTGCCTTAGC CCTACTATTA GGTGCGCTAG GAACATCAGT ACCTATTGCT CAAGCTGCAT CAAGCTTTCA AGTTGAAGAC ATCGAAGTTA AAGGTCTTCA ACGTGTTGCT TTAGGGGCCG CGTTAACGCA TATACCTTTC AATGTCGGTG ACGAACTCAA TGACTTTCGA ATTTCACAAT CTATAAAGGC CTTATACCAA GCCGGTCACT TTAATGATAT TAGAGTTTAC CGAGATGGTA ATCGCTTGGT TTATCGTGTT AGAGAACGAG AAACAATAAA CGAAATTATT TTTGATGGTA ATAGCGATCT TAAAGATGAG CAGCTAACAG AAAGTCTTGA TGGTAGTAAT ATTCGTGTCG GTGAAACTCT TGATCGCACC GTCATCTCTG GTATAGAGAT GGGCTTAGAG AACTTCTATC ACAGTGTGGG TAAATACAAT GCGAAAGTGA CCGCTAAAGT AACCCATTTA CCACGAAACC GCGTTAATTT AGAGTTCTCA TTTGTTGAGG GTGACTCTGC TGCTATCAAA CAAATAAATA TTGTTGGTAA CGAAGTTTTT TCTGATATAG AAATTCTGGA TAAAATTGAG CTAACGTATG ATTCCCCTTG GTGGAATTTT ATGGCGCAAG ACAGATATCA GAAACAAACG TTACAAGGGG ATATGGAAAC GATTAATAGT TATTATCTTA ATCGCGGCTA TTTACGCTTT AAAGTAGACT CCACACAAGT ATCAATGACC CCAGATAAAA AAGCGGTCTA TATCGCCCTT AATGTGAGTG AAGGTGAAAC TTATAACATT AGTGAAGTTG ACTTTGTCGG TGACATGGCT GGTTTTGAAA ATACCATCCG TGCTATTAAC CCATTACAAG CGGACGAGTT ATATAACGGT GCAGAAGTTA CTTATACTGA AGAAGTTATT AGTAAATTTT TAGGTCGCTA TGGTTATGCT TATCCTAAAG TGAGAACCAT TCCAGAAGTT AATGACGAAA ACCATACCGT TAAATTATCA ATATCGATTG ATCCCGGAAA GCGTGTTTAT GTAAATCGCA TAAACTTCAC AGGTAATCAT GTTACTGCTG ATAACGTATT ACGCCGTGAA ATGAGACAAA TGGAAGGTGC TTGGTTATCT AACAGTGTAG TTGAATCTTC AAAGTCATGG TTACAGCGTC TACCTTATAT GGAGACCGTT GAGTTTGAAA CTAAACAAAT TGAAGGTGAA GATGATTTAG TCGATATCGA CTTTACTGTT AAAGAACAGC CTTCTGGCTC ATTTAATGCT GGTATAGGTT ATGGTTCAGA AACAAAGTTA AGCCTTAACG CGGGTGTACA ACAAAACAAC TTCCTAGGCA CGGGTAATCA ACTGGGCTTA AACATTGCCA GAAACAGTTA TCAAAAAAAT GCCACTATCT CGTACACTGA CCCTTACTTT ACCGTTGATG CTGTCTCCCT TGGTGGACAA GTTTATTACA GTGAATATGA TGCTGGTAAT GCCAACTTGG TTGAATATAA GAACAAAACC TTCGGCCTAG GTCTTAACTG GGGTTTTCCA GTCAATGAAT ATCTTCGCTT AAATTTTGGT GTAGGTTGGA AGTATAACCA AATATCGCAA TTAGAAGCGT ATGATCAGAT TCAAAACTTT TATGATATCT ATGCTGATCC TAATGACCCC GATGGTCAAT TAGCCTTTAA AACGTTAGAT TTAAATGCTG GTTTATCACG AAGCACACTA AACCGTGGTA CTTTTCCTAC GTCAGGTTCA CAACAACGAT TTAATGCGAA AATGACGTCA CCAAAGTCTG ATTTGCAATA CTTCAAACTA AATTATGATG CTAAATTTTA TTTCCCATTA ACCCGAAGTC AAAAATGGTC AGTACTAACT CGTATACAGT TAGGCTACGC CAATGGTTAC GGAACCGTTG ATGGCAATGA TCAATTATTA CCTTTCTGGG AGAACTTTAG TGCAGGTGGC TCAGATTCTT TAAGAGGTTT TGAGAATAAC AGTGTTGGAC CTCGTGCTAT ATATCGTAGC CCGAAGCAAC TACCTGGTGG GGGCTGTTGT TTAGGTCCTG ACAATGATTC TATTGCGGTA TCACAAAGCT CTGTTGGTGG TAATGCTATG GCGCTTGCAG GCTTAGAGTT GATAGTACCA ACACCTTTCT TAGACGAAAG TTACTCAAAC AGTGTACGTA CCAGTATTTT TTGGGACGCA GGTACTGTTT GGGATACAGA ATTTAACATG GCAAGTTATT CAAATTTAGC GCCTGAAGAG TTTGCTAAAA TTGACGACTA TTCAGATCCG GGACGTTTTC GTAGCTCTGC AGGTATTTCA CTGCAATGGC TTTCGCCAAT GGGACCAATG ATTTTTAGTT TCGCTAGATC CGTTAGAGAA GAAGAGGGTG ATGATCTATC ATTCTTTAGC TTTAACATAG GAAAAACATT TTAA
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Protein sequence | MKKIALALLL GALGTSVPIA QAASSFQVED IEVKGLQRVA LGAALTHIPF NVGDELNDFR ISQSIKALYQ AGHFNDIRVY RDGNRLVYRV RERETINEII FDGNSDLKDE QLTESLDGSN IRVGETLDRT VISGIEMGLE NFYHSVGKYN AKVTAKVTHL PRNRVNLEFS FVEGDSAAIK QINIVGNEVF SDIEILDKIE LTYDSPWWNF MAQDRYQKQT LQGDMETINS YYLNRGYLRF KVDSTQVSMT PDKKAVYIAL NVSEGETYNI SEVDFVGDMA GFENTIRAIN PLQADELYNG AEVTYTEEVI SKFLGRYGYA YPKVRTIPEV NDENHTVKLS ISIDPGKRVY VNRINFTGNH VTADNVLRRE MRQMEGAWLS NSVVESSKSW LQRLPYMETV EFETKQIEGE DDLVDIDFTV KEQPSGSFNA GIGYGSETKL SLNAGVQQNN FLGTGNQLGL NIARNSYQKN ATISYTDPYF TVDAVSLGGQ VYYSEYDAGN ANLVEYKNKT FGLGLNWGFP VNEYLRLNFG VGWKYNQISQ LEAYDQIQNF YDIYADPNDP DGQLAFKTLD LNAGLSRSTL NRGTFPTSGS QQRFNAKMTS PKSDLQYFKL NYDAKFYFPL TRSQKWSVLT RIQLGYANGY GTVDGNDQLL PFWENFSAGG SDSLRGFENN SVGPRAIYRS PKQLPGGGCC LGPDNDSIAV SQSSVGGNAM ALAGLELIVP TPFLDESYSN SVRTSIFWDA GTVWDTEFNM ASYSNLAPEE FAKIDDYSDP GRFRSSAGIS LQWLSPMGPM IFSFARSVRE EEGDDLSFFS FNIGKTF
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