Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1531 |
Symbol | ribH |
ID | 3519446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1573322 |
End bp | 1573786 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283994 |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_268273 |
Protein GI | 71279049 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0054] Riboflavin synthase beta-chain |
TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.556291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA TTGAAGGTTC GTTTGAAGCA AAAGGCAAGA AATTTGCTAT CGTTGTATCG CGTTTTAATC ACTTTATAGT TGATAGTTTA TTAGACGGCG CTGTTGATGC CCTTAAACGT CATGGTAATG TTAATGACGA AGATATTACT ATCGTTCGAG TACCTGGTGC ATATGAGTTA CCTCTAGCAG CTAAAAAAAT TGCTAAAAAA GGCGAGGCGG ATGCAATTAT TGCCATCGGT GCTGTTATTC GTGGTGGCAC TCCGCACTTT GATTTTGTTG CGGGTGAATC TAATAAAGGT TTAGCACAAG TTTGTTTAGA ATCTGAGATT CCAGTTTCAT TTGGTGTGAT TACAACCGAC TCTATTGAAC AAGCCATTGA ACGTGCAGGT ACTAAAGCTG GCAATAAGGG TGCTGAAGCT GCTCTTGGTG CATTAGAAAT GGTTAATGTA TTAGCTCAAA TTTAA
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Protein sequence | MNIIEGSFEA KGKKFAIVVS RFNHFIVDSL LDGAVDALKR HGNVNDEDIT IVRVPGAYEL PLAAKKIAKK GEADAIIAIG AVIRGGTPHF DFVAGESNKG LAQVCLESEI PVSFGVITTD SIEQAIERAG TKAGNKGAEA ALGALEMVNV LAQI
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