Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1511 |
Symbol | fliO |
ID | 3522951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1553832 |
End bp | 1554461 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637283974 |
Product | flagellar protein FliO |
Protein accession | YP_268253 |
Protein GI | 71282476 |
COG category | [N] Cell motility |
COG ID | [COG3190] Flagellar biogenesis protein |
TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.259812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAA AAACACTACG CATATTACTG GCTTTTAGTT GTTCTTTACT GTCTCTAATT GTTTTAGCGC AAGAAAATAC TTCTGAAAGT GAATTAGTTG GCAGTGTTGT TACTGAAAAA ATTGTTAATG ATGACGTAAT ATCTCAGCAA GATGCGAGTC TACAAAGTAT AACTCAGCAA AGCACAACGG TTAAAAGCGC AATTGAGCAA GATAGCCAGG AAAAAAGTTC TGCACAACAA GGATTAACTC AACAAGCTTC TGACTCTCAA ATACTCAATA ATGATAAACC GAAAGTTGGT AGCCATGTTA TGGCAAATAT GGATGCTGGC AGTATGATAC TGTCGTTGTT AATGGTCTTA GCGTTAATCA TTATTTGTGC TTTTGTGCTT AAACGTTTTA ATCTTACTCA ACAAGGTGTT AGCCAACTAA AAGTGGTGAC GAGTTTATCG TTAGGTGCTA AAGAGCGTGT GGTTGTGATT CAAGCAGGAG AACAACAGTT ACTTTTAGGG GTTACCGCTC AACAAGTGAC TTTAATTGAG CGCTTAGAAA AGCCGTTAGC AACTCAAACA ATGAAAGCAA CTGAGTTGCC AAAAAATTTG ATGTCTTTCC TATTGGCTAA AAAGTCGTAG
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Protein sequence | MILKTLRILL AFSCSLLSLI VLAQENTSES ELVGSVVTEK IVNDDVISQQ DASLQSITQQ STTVKSAIEQ DSQEKSSAQQ GLTQQASDSQ ILNNDKPKVG SHVMANMDAG SMILSLLMVL ALIIICAFVL KRFNLTQQGV SQLKVVTSLS LGAKERVVVI QAGEQQLLLG VTAQQVTLIE RLEKPLATQT MKATELPKNL MSFLLAKKS
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