Gene CPS_1510 details

Gene Information

• Locus tag: CPS_1510
• Symbol: fliN
• ID: 3522651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1553393
• End bp: 1553788
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637283973
• Product: flagellar motor switch protein
• Protein accession: YP_268252
• Protein GI: 71282178
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.176164
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAACG AAAAAGATGA AGATCTAAGT ATGTGGGATG AGGCGCTAGA TGAGCAAGCT 
GAAGCAAAAG CAGGTGCTGA AACAGTTGAG TTGGAAGAGT TAACACCAGA TGATGCACCT 
ATTACCGGTG ATGAGAAGCG TAAGCTTGAT GCTATTTTAG ATATTCCGGT TACTATTTCG 
ATGGAAGTAG GTCGAAGCAA TATCAGTATT AGAAATTTAT TACAATTAAA CCAAGGTTCG 
GTAGTTGAAT TAGACCGAGT TGCTGGTGAG TCACTTGATG TGTTAGTTAA TGGTACCTTA 
ATTGCCCATG GTGAAGTGGT TGTTGTTAAC GATAAGTTTG GTATTCGTTT AACGGATGTA 
GTTAGCCAAG TTGAACGTAT TAAAAAGTTA AAATAA 

 

Protein sequence

MSNEKDEDLS MWDEALDEQA EAKAGAETVE LEELTPDDAP ITGDEKRKLD AILDIPVTIS 
MEVGRSNISI RNLLQLNQGS VVELDRVAGE SLDVLVNGTL IAHGEVVVVN DKFGIRLTDV 
VSQVERIKKL K