| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1502 |
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| Symbol | fliF |
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| ID | 3522345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1543859 |
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| End bp | 1545550 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637283965 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_268244 |
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| Protein GI | 71281873 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCA GTGAAGCTGA AGGTGCGGGG ATAGGTGAGC AAAAATCAGG TTTCGCTGCC
TCATTAGGTA GTGTTGATAT TTTACGACAG GTTACCATAG TGGTTGCATT GGCTATTTGT
TTAGCTATTG CGGTATTTGT TATTATGCTC GCTAATGAAC CTGAATACCG TGTTATTTCA
AAATTACCTA CTAAGCAGTT AATTACTACC ATGGACTTTC TTGATGCCAA TCAAGTGGAA
TATCAACAAG AAAACAATAC TATTTCAGTC CCTGCAGATG AATATCAAAA TGTGAAATTA
TTGTTAGCTC GAGAGGGGTT AACAGACGAG CCTTCACAAG GTGAAGATAT TTTAATGAAA
GATATGGGCT TTGGTGTTAG TCAGCGACTA GAGCGTGAAA GATTAAAATT TGGCAGAGAG
CAGCAAATTG CTAAAACAAT AGAACAGTTA AAAAGCATAA GTCGAGCTAA AGTACTCCTG
GCTATTCCCC GTGAAAATAT ATTTGCCCGT CGAGAAAAAA ATCCATCTGC GACAGTAGTG
CTTACCATGC AGCGCGGTAA AATTCTTTCA GAAGAAGAAG TTGATGCTGT TGTTGATATT
GTTGCCTCAG CAGTACAAGG TTTAACGCCT AATCGTGTCA CCGTGACTGA TCAAAATGGG
CGCTTACTTA ATTCAGGCTC ACAAGACTCT ATTTCATCTC GCTCAAGAAA AGAGTTTGAG
ATTGAACAAA AACGTGAACA AGAATACATG GAGAAAATTG ACAGTATTCT TATTCCTGTT
GTTGGTTTAG GCAACTATAC TGCGCAAGTT GATATCACCA TGGACTTTAC CAATGTTGAA
GAAACACAGC GTCGTTACAA TTCAGATTTA CCCGCGCTGC GTAGTGAAAT GAGCGTTGAA
AGCACTAATA TTGGTGGTGC ATTAGGCGGA ATTCCAGGCG CCTTAACAAA TCAGCCACCG
ATTGCCTCTG CTATTCCTGA AGATGCAACG GGTGGACAAA AGAGAAGCAT GCCAAGCAGA
AAGCATTCTG AGTCGACTAA AAACTATGAA CTTGATGAAG CAATCAGCCA TACTAAGCAG
CAAGCTGGCG TTGTAAGACG TGTTAGCGTA TCGGTAGCCC TCGATTATGT CGCAGGCGTT
GCAACAACTC CCGTTGAAGG CGGAGCAAAT ACTCCCGCAG CAACTTTTGC ACCACGCTCT
GCAGGAGAAA CAGCCAGTAT TCGTCGTCTA TTACAAGGTA GTATTGGTTT TGATTTGCAG
CGTGGTGATG TTTTAGAAGT AGTAACCATT CCCTTTAATC GTCCAGATTA CGGCGTAGTA
GCTGAGATAC CTATTTGGCA GCAACCTTGG TTTATTAAAG TACTCAAATT AGTCTTGGGC
GCTTTAGTTA TTATCGTGCT AATTCTAGCC GTTGTTCGCC CAATGCTGAA ACGTTTAATC
TACCCAGAGC AAACACCAGA TGATTATGGT GATAAATCAC TTGATGGTCA TATTGATTTA
GGTGATGAAA CCATGGATAT GTTGACGTCT GATTTTGACG CTGGCGCAGT CGGTTTTGCA
GCAGATGGCA GTTTACAATT ACCTGATCTT CATCGAGATG AAGATGTATT AAAAGCGGTT
CGAGCGTTAG TCGCCAATGA GCCAGAATTA TCATCGCAAG TAGTTAAAAG TTGGTTGAAC
GAAGATGAGT GA
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| Protein sequence | MIASEAEGAG IGEQKSGFAA SLGSVDILRQ VTIVVALAIC LAIAVFVIML ANEPEYRVIS
KLPTKQLITT MDFLDANQVE YQQENNTISV PADEYQNVKL LLAREGLTDE PSQGEDILMK
DMGFGVSQRL ERERLKFGRE QQIAKTIEQL KSISRAKVLL AIPRENIFAR REKNPSATVV
LTMQRGKILS EEEVDAVVDI VASAVQGLTP NRVTVTDQNG RLLNSGSQDS ISSRSRKEFE
IEQKREQEYM EKIDSILIPV VGLGNYTAQV DITMDFTNVE ETQRRYNSDL PALRSEMSVE
STNIGGALGG IPGALTNQPP IASAIPEDAT GGQKRSMPSR KHSESTKNYE LDEAISHTKQ
QAGVVRRVSV SVALDYVAGV ATTPVEGGAN TPAATFAPRS AGETASIRRL LQGSIGFDLQ
RGDVLEVVTI PFNRPDYGVV AEIPIWQQPW FIKVLKLVLG ALVIIVLILA VVRPMLKRLI
YPEQTPDDYG DKSLDGHIDL GDETMDMLTS DFDAGAVGFA ADGSLQLPDL HRDEDVLKAV
RALVANEPEL SSQVVKSWLN EDE
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