Gene CPS_1487 details

Gene Information

• Locus tag: CPS_1487
• Symbol: flgL
• ID: 3518853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1528385
• End bp: 1529605
• Gene Length: 1221 bp
• Protein Length: 406 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637283950
• Product: flagellar hook-associated protein FlgL
• Protein accession: YP_268229
• Protein GI: 71278519
• COG category: [N] Cell motility
• COG ID: [COG1344] Flagellin and related hook-associated proteins
• TIGRFAM ID: [TIGR02550] flagellar hook-associated protein 3

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.893149
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGTTT CAACGTCTCA ATTTTATTTA CAAAGTGCTC TTCTCATGAA CCAAAAAAGT 
GCTGATGTTA ATAATCAAAT GGAACATCTA TCAAGTGGTA AACGTGTACT AACCGCGAAA 
GATGATGCGG TTTCTTACGG CACACTATCT GGTTTCAATG ATGATTTAGC GAGTATTGAA 
AAATATAAAC GCAATATTAC CATGGCTGAA AATCACAATA GCATGCAAGA AGTAATTTTT 
GCTGATGCGG AAACATTATT AGATAAGTTC AAACAAGATA TGTTATTGGC AAATAATGGC 
CGAATGTCTA ACGAAGATTT GCAATCTATT GCCGATCAAA TGCGACATGG TTTAGACCAG 
CTGATTGATC TTGGTAATAG CCAAGATGAA AAAGGTGATT ATATCTTCTC TGGTTTCCAG 
ACCCAGCAAA AACCCTTTAG TCAACAAGTT GACGGTTCGG TTGATTACAA TGGTGATAAG 
GGAGTAAATG AACTACAAGT AGCTAAAAAC ATTCAAATAC CGACAAACCA AACGGGTGAT 
GCCGCTTTTT TAAATATTGA TAATGCCATC GGTGATTTTA CGGCTACTTA TCCTACAGTT 
CCTGTTAATA CCTCGGGTGT GGCAGTGGAA AGCGCGAATG TAGTCGATAG AAATACCTAC 
AACGTAAGTA CTGGGCCTCA TACATTTTCT TTTGACCCAA TAACTAACTA TTTAACGGTT 
ACCGATAGCA CTCTTCCCAT TCCCGCGGTT GTTTTTCCTC CCGCACCTTA TGTAGCAGGG 
CAAACTATTT CCTTTGACGG TATTGACGTT ACCTTAAGCG GCAACCCATT GCCGGGTGAT 
AGTTTTGTCA TTAACGAAAA ACAAAATATT AGTATTTTTG AAACTCTTAA TAATGCCATT 
AGCTGGGCTG AACAAGGTGT AGTGTCAACC AACCAAGAGC AGCATCAAGT TGATTACAAT 
ACAGTCCTCG ACCAGCTTAG TTCCGCTATG AACCATATAT ATTCTCGTAG AGCAGATGCG 
GGTATTAGGC TGCAAGCGTT AGAAAACCAG CAGAGTAAGC ACTTAGACGT AGAGTTAAAT 
ATTAGCAAAG GTAAATCGAG TATTGAAGAT TTAGATTTCG CCAAAGCTAT TTCGGAGTTT 
GAGCAATCAA AAATTGCTTT AACGGCTTCA CAGCAAACGT TTAGTAAAGT GCAGGGCTTA 
ACGTTATTTA ATTATATATA A 

 

Protein sequence

MRVSTSQFYL QSALLMNQKS ADVNNQMEHL SSGKRVLTAK DDAVSYGTLS GFNDDLASIE 
KYKRNITMAE NHNSMQEVIF ADAETLLDKF KQDMLLANNG RMSNEDLQSI ADQMRHGLDQ 
LIDLGNSQDE KGDYIFSGFQ TQQKPFSQQV DGSVDYNGDK GVNELQVAKN IQIPTNQTGD 
AAFLNIDNAI GDFTATYPTV PVNTSGVAVE SANVVDRNTY NVSTGPHTFS FDPITNYLTV 
TDSTLPIPAV VFPPAPYVAG QTISFDGIDV TLSGNPLPGD SFVINEKQNI SIFETLNNAI 
SWAEQGVVST NQEQHQVDYN TVLDQLSSAM NHIYSRRADA GIRLQALENQ QSKHLDVELN 
ISKGKSSIED LDFAKAISEF EQSKIALTAS QQTFSKVQGL TLFNYI