Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1433 |
Symbol | |
ID | 3519883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1471225 |
End bp | 1471992 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637283897 |
Product | IclR family transcriptional regulator |
Protein accession | YP_268176 |
Protein GI | 71279425 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTTC AGCGAAGAGA GAAAGGTTCA TCTATCACTA GGGTGCTTGA AATCATCGAG GCAATTTCTC GTGCCGAGCG ACCTATGTCA CCCGCTGAGT TAGCATTTTT ACTTGATATT CCTAAACCCA GTATTCATCG TTTACTACAG CAACTTGAAG CTGATAATTA TGTGCAGATT AATATGCGCG GCTTGTTGGT TCCTGGTGAT CGGATGCATA GTATTGCTTT AGGTGTGCTC CATAGCAGCC GATTTAAAGC ATTGCGTCAG GCCATTCTAA AAAAACTGGC GGAAACCATT GGTGAAACCT GTGGTATCGC AATTCCTGAT GGCATCGAAA TGATCTATTA CGATCGTGTT CAAACTAATT GGCCATTACG AGTTAATTTA CCTGTCGGTA GTCATACGCC TGTAGCGTGT ACTGCCAGCG GAAAGCTTTA TTTAAGTTCT CTGCCTAAAG AACGTCGTCA TCGTATTATA GGTAAGTTAT CACTTGAAAA GCTGGCTCGT AATACGTTAA TTGAGTCAGA ATCATTAGAA AAAGAGCTTA TAAATATCCA AGCTAATGAG TTAGGAACCG ATAACGAAGA ATTTATAGAT GGCATGGTTG CCTGTTCGGT GCCTATTAAA GATCAAGATG GTAAGTTGTT TGCCTGTCTT TTCACCCATG CCCCCGTGAT CCGCAAAAGT TTAGATGAAT TATTAGCCTT TGAACCAGCA TTGCGCCATG CGGCCATAGA GTTAGGTGAT CTACTCAAAG AACAATAA
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Protein sequence | MTVQRREKGS SITRVLEIIE AISRAERPMS PAELAFLLDI PKPSIHRLLQ QLEADNYVQI NMRGLLVPGD RMHSIALGVL HSSRFKALRQ AILKKLAETI GETCGIAIPD GIEMIYYDRV QTNWPLRVNL PVGSHTPVAC TASGKLYLSS LPKERRHRII GKLSLEKLAR NTLIESESLE KELINIQANE LGTDNEEFID GMVACSVPIK DQDGKLFACL FTHAPVIRKS LDELLAFEPA LRHAAIELGD LLKEQ
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