Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1408 |
Symbol | |
ID | 3518656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1447770 |
End bp | 1449935 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283872 |
Product | neutral zinc metallopeptidase M4 family protein |
Protein accession | YP_268151 |
Protein GI | 71277778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3227] Zinc metalloprotease (elastase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0448524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTG TTCAATCACT TTTATTGCTG ACAAATCTCA TCCAATTAAG CCTTATTCGA TTTAAACTAC TCATTTGTAT ATTTTTGACT TTATTTCTTG TTTCGTGTGG TGGCGGTAGC TCTGATTCTA CTCCGATTAA ACCGCCAGCA ATTGAAGAAC CTCTAAACCC CGTTACTGAA GTGCCAACGA ATCAAATATT AAATGCGTTT TTTCGTGATC AAGATAGTGC TATTGGCAAA CTCTCTGGCA TCGTAACAAT TTCCGCCCCT GAAGTTATTT ATAGCGACCC CGCTAAAGTT GAGTCTGTGT GGGTTTATTG GGTAGATGAG CAAGGAAATA AACAGGGCGA TGCATGGTTA AAAACTGCGA GTAAAACGGT TTACCACCTT GATATTCCAG AAGATACAAG TATACCTGCA AATACCAATG CGCTATTGCT TTTGCCAGTA AACACCATTG GGCAGGCCAC AAAAGGTACC CTTATTTCCT TTCATGATTT CATCGGTAAT GCTGAATTAT CGGGGCCTGG GGGGAATGAA GTTCACACTT GGGAGTATGG CGTAGATCGC AGAAAAATTT CAATTCAACG CACAGAAGAG CAAGGTGGAC TATGTATCTT TGATAATGGT TTAGTCAGCA TTGCTAATAT GAATAATACT AAGGATGAGG CTTGGGAGAG TAATACCGGC AACATGCTTC CTAACGACGT TAATGAGAAT GCTTTCCCTC CTTATTCCTT TTTATGTGAT ACGCAGCCGA CACATTCCGA AGATATAATT TCTGATGAAA TTGGGGTATG GACATATTCA ACGCTCAATG ACGCCATGTT TTACGGCACA GTCGTTTACG ATAGCTTTGT TAAATACCTT GGCGAGCCGC CGCTGGAAGA AAAAATTAGA ATCCGTGTTC ACTATGGTGA ACAATATGGC CAAAGTGCCT ATTGGGATGG TGCATATGCT AACTTTGGTG ATGCGTATCC GTTATTTTAC TCTATGGTTT CACTTGACTC CATTGCCCAC GAGGTCGGCC ATGGTGTTTT AAATAGAGTG TCCGATTTAA ATCTATTCGA TCATGAAATT AGTACTGATG CTCGTACCTT GCACGAAGCC TTTGGCGATA TCTCAGGTGT CATGGCAAAA TACGAGTTTA CTGGGCATAC AAATAACTGG ATTCACGGCC AAGAGAATGG TGGTTTAACT CGTCATCTCG ATCAGATAAA AACTGAAAAT GGTGCCATTG ATAGTTTTCT CGATTATGAA GAGGCTGGTG ATAATTTCTA TTTACGCATT GGCATGATCT CCTATCCGTT TTATTTATTA TCAAATCAAT GGGGCATAGA ACCTACCTAT AAAGTGTATT TAAATTCAGC CAAGGTCTGT TGGAGTGCGA TGACCACACT AACTGAAGCT GCAGAATGTA TTAAACAACA AGCAGGTGTT GCTGGCTTAC CTGAAGAAGA TGTCATTGAG GCTTTTAAAA TGGTAAAAAT AAAACTTTTT GACCAAGGGG TACTCAGCCA TTTTACTGCA GAGAAAATTA AATTACACAC TCAATTTATC GATGATAGCC GAACAACGAG TCAAGTCGTT CAATGGCTTT GGGATTTTGG CGATGGTCAA ACCTCAACAG AAGCAAGCCC TGAGCATATC TTTGCAGAAT CAGGAAGCTA CCCAATTAAG TTGACAGTAA CTGATCAATC CGATGATCAG GATACCTTTG AGCGGCTTAT TCAGGTAACA GATCAGTATT GCTCAATAAA CTCTGTTGGC GTCGATAAGC ACATCAGCCA GATTTCAATT GGTGGCAACG ACATTAATTA TAATTCAACA GCATGGGACT ATACCCAAAT GCCTATCGAG CTAACAAATC CCAGCAATAC CATCATCAAT ATCCAAGGAG ATACCGAGGT AACAGAACGA TCGACCACAT GGAAAGTCTG GATTGACCTC AACGATAATG GAATTTATGG CGATGAGGTT AATGAGCTTG TCGTAAATAA ATTTGTCGCA GAGGGACAAC CTTATAGCCT TAATACTTTA CTCGATTTAT CAACTCTGCC AAATAGCAGT CAGGCTAAAT ATATGAGAAT TATTGGTGAC TATGCCGTTA TTGGGCCTTG TTCTTCGAGT ATAGGGGAAG CGCTAGATTT AAGAGTGAGT TGGTAG
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Protein sequence | MTFVQSLLLL TNLIQLSLIR FKLLICIFLT LFLVSCGGGS SDSTPIKPPA IEEPLNPVTE VPTNQILNAF FRDQDSAIGK LSGIVTISAP EVIYSDPAKV ESVWVYWVDE QGNKQGDAWL KTASKTVYHL DIPEDTSIPA NTNALLLLPV NTIGQATKGT LISFHDFIGN AELSGPGGNE VHTWEYGVDR RKISIQRTEE QGGLCIFDNG LVSIANMNNT KDEAWESNTG NMLPNDVNEN AFPPYSFLCD TQPTHSEDII SDEIGVWTYS TLNDAMFYGT VVYDSFVKYL GEPPLEEKIR IRVHYGEQYG QSAYWDGAYA NFGDAYPLFY SMVSLDSIAH EVGHGVLNRV SDLNLFDHEI STDARTLHEA FGDISGVMAK YEFTGHTNNW IHGQENGGLT RHLDQIKTEN GAIDSFLDYE EAGDNFYLRI GMISYPFYLL SNQWGIEPTY KVYLNSAKVC WSAMTTLTEA AECIKQQAGV AGLPEEDVIE AFKMVKIKLF DQGVLSHFTA EKIKLHTQFI DDSRTTSQVV QWLWDFGDGQ TSTEASPEHI FAESGSYPIK LTVTDQSDDQ DTFERLIQVT DQYCSINSVG VDKHISQISI GGNDINYNST AWDYTQMPIE LTNPSNTIIN IQGDTEVTER STTWKVWIDL NDNGIYGDEV NELVVNKFVA EGQPYSLNTL LDLSTLPNSS QAKYMRIIGD YAVIGPCSSS IGEALDLRVS W
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