Gene CPS_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1408 
Symbol 
ID3518656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1447770 
End bp1449935 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content41% 
IMG OID637283872 
Productneutral zinc metallopeptidase M4 family protein 
Protein accessionYP_268151 
Protein GI71277778 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0448524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTG TTCAATCACT TTTATTGCTG ACAAATCTCA TCCAATTAAG CCTTATTCGA 
TTTAAACTAC TCATTTGTAT ATTTTTGACT TTATTTCTTG TTTCGTGTGG TGGCGGTAGC
TCTGATTCTA CTCCGATTAA ACCGCCAGCA ATTGAAGAAC CTCTAAACCC CGTTACTGAA
GTGCCAACGA ATCAAATATT AAATGCGTTT TTTCGTGATC AAGATAGTGC TATTGGCAAA
CTCTCTGGCA TCGTAACAAT TTCCGCCCCT GAAGTTATTT ATAGCGACCC CGCTAAAGTT
GAGTCTGTGT GGGTTTATTG GGTAGATGAG CAAGGAAATA AACAGGGCGA TGCATGGTTA
AAAACTGCGA GTAAAACGGT TTACCACCTT GATATTCCAG AAGATACAAG TATACCTGCA
AATACCAATG CGCTATTGCT TTTGCCAGTA AACACCATTG GGCAGGCCAC AAAAGGTACC
CTTATTTCCT TTCATGATTT CATCGGTAAT GCTGAATTAT CGGGGCCTGG GGGGAATGAA
GTTCACACTT GGGAGTATGG CGTAGATCGC AGAAAAATTT CAATTCAACG CACAGAAGAG
CAAGGTGGAC TATGTATCTT TGATAATGGT TTAGTCAGCA TTGCTAATAT GAATAATACT
AAGGATGAGG CTTGGGAGAG TAATACCGGC AACATGCTTC CTAACGACGT TAATGAGAAT
GCTTTCCCTC CTTATTCCTT TTTATGTGAT ACGCAGCCGA CACATTCCGA AGATATAATT
TCTGATGAAA TTGGGGTATG GACATATTCA ACGCTCAATG ACGCCATGTT TTACGGCACA
GTCGTTTACG ATAGCTTTGT TAAATACCTT GGCGAGCCGC CGCTGGAAGA AAAAATTAGA
ATCCGTGTTC ACTATGGTGA ACAATATGGC CAAAGTGCCT ATTGGGATGG TGCATATGCT
AACTTTGGTG ATGCGTATCC GTTATTTTAC TCTATGGTTT CACTTGACTC CATTGCCCAC
GAGGTCGGCC ATGGTGTTTT AAATAGAGTG TCCGATTTAA ATCTATTCGA TCATGAAATT
AGTACTGATG CTCGTACCTT GCACGAAGCC TTTGGCGATA TCTCAGGTGT CATGGCAAAA
TACGAGTTTA CTGGGCATAC AAATAACTGG ATTCACGGCC AAGAGAATGG TGGTTTAACT
CGTCATCTCG ATCAGATAAA AACTGAAAAT GGTGCCATTG ATAGTTTTCT CGATTATGAA
GAGGCTGGTG ATAATTTCTA TTTACGCATT GGCATGATCT CCTATCCGTT TTATTTATTA
TCAAATCAAT GGGGCATAGA ACCTACCTAT AAAGTGTATT TAAATTCAGC CAAGGTCTGT
TGGAGTGCGA TGACCACACT AACTGAAGCT GCAGAATGTA TTAAACAACA AGCAGGTGTT
GCTGGCTTAC CTGAAGAAGA TGTCATTGAG GCTTTTAAAA TGGTAAAAAT AAAACTTTTT
GACCAAGGGG TACTCAGCCA TTTTACTGCA GAGAAAATTA AATTACACAC TCAATTTATC
GATGATAGCC GAACAACGAG TCAAGTCGTT CAATGGCTTT GGGATTTTGG CGATGGTCAA
ACCTCAACAG AAGCAAGCCC TGAGCATATC TTTGCAGAAT CAGGAAGCTA CCCAATTAAG
TTGACAGTAA CTGATCAATC CGATGATCAG GATACCTTTG AGCGGCTTAT TCAGGTAACA
GATCAGTATT GCTCAATAAA CTCTGTTGGC GTCGATAAGC ACATCAGCCA GATTTCAATT
GGTGGCAACG ACATTAATTA TAATTCAACA GCATGGGACT ATACCCAAAT GCCTATCGAG
CTAACAAATC CCAGCAATAC CATCATCAAT ATCCAAGGAG ATACCGAGGT AACAGAACGA
TCGACCACAT GGAAAGTCTG GATTGACCTC AACGATAATG GAATTTATGG CGATGAGGTT
AATGAGCTTG TCGTAAATAA ATTTGTCGCA GAGGGACAAC CTTATAGCCT TAATACTTTA
CTCGATTTAT CAACTCTGCC AAATAGCAGT CAGGCTAAAT ATATGAGAAT TATTGGTGAC
TATGCCGTTA TTGGGCCTTG TTCTTCGAGT ATAGGGGAAG CGCTAGATTT AAGAGTGAGT
TGGTAG
 
Protein sequence
MTFVQSLLLL TNLIQLSLIR FKLLICIFLT LFLVSCGGGS SDSTPIKPPA IEEPLNPVTE 
VPTNQILNAF FRDQDSAIGK LSGIVTISAP EVIYSDPAKV ESVWVYWVDE QGNKQGDAWL
KTASKTVYHL DIPEDTSIPA NTNALLLLPV NTIGQATKGT LISFHDFIGN AELSGPGGNE
VHTWEYGVDR RKISIQRTEE QGGLCIFDNG LVSIANMNNT KDEAWESNTG NMLPNDVNEN
AFPPYSFLCD TQPTHSEDII SDEIGVWTYS TLNDAMFYGT VVYDSFVKYL GEPPLEEKIR
IRVHYGEQYG QSAYWDGAYA NFGDAYPLFY SMVSLDSIAH EVGHGVLNRV SDLNLFDHEI
STDARTLHEA FGDISGVMAK YEFTGHTNNW IHGQENGGLT RHLDQIKTEN GAIDSFLDYE
EAGDNFYLRI GMISYPFYLL SNQWGIEPTY KVYLNSAKVC WSAMTTLTEA AECIKQQAGV
AGLPEEDVIE AFKMVKIKLF DQGVLSHFTA EKIKLHTQFI DDSRTTSQVV QWLWDFGDGQ
TSTEASPEHI FAESGSYPIK LTVTDQSDDQ DTFERLIQVT DQYCSINSVG VDKHISQISI
GGNDINYNST AWDYTQMPIE LTNPSNTIIN IQGDTEVTER STTWKVWIDL NDNGIYGDEV
NELVVNKFVA EGQPYSLNTL LDLSTLPNSS QAKYMRIIGD YAVIGPCSSS IGEALDLRVS
W