| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1325 |
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| Symbol | |
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| ID | 3519035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1363906 |
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| End bp | 1365192 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283789 |
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| Product | sensory box protein |
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| Protein accession | YP_268068 |
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| Protein GI | 71278350 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.294155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTTC TTAGTGATCA CGACACGCTT ATCAGCTCAA TTGAGGCTAT TGGCGCTAGT
TTTGCTGTAT TTGAGTTCGA CCCTCAGTCG GTAGCTTTTG AACTGGTCAG TTGCAATAGT
CGCTATGAGG ATCTTATGGG ATATTCAAGC GCAAAAGCAC TTGGTCAGCC ACTGACAACA
ATCTTCCCAA GATACATTCA CAACCCATTA AAAGAAGCAT TCATTCATTG TAAAAATGAA
CGCATTGCTT TGGAAACTGA GATTGTGCTT GACTATAAAG GCCAAGAAAG ATGCTGGCGT
TCAATAGTAT CTCCTATCGT AAACTCAGCT GATGAAAAAT TTCGAATCAT TCAAACCTGT
GTTGAAATCA CTGAAAAAAA GGTCTTAGAA AAACAGCTAA ACCTCTCAAT GAAACGATTC
GAAGCGGTAG TTAATAACGC TTATGACGGT ATAATTACCA TTGATGAACA GCAAAATGTG
AAGCTTTTTA ACGAAGCTGC CCAATCAATG TTTGGCTACA GTGAACAAGA AATAATGGGT
CAGCCACTCA CCAAGTTATT ACCTGAAAAA TACCAAGCTA AACATCATGG TTATGTCGAA
GGGTTCAAAA GATCACAAGT AGATTCTAGA CCCATGCAAA CTAGAGCAGC CGTGCAAGGC
CTTAGAAAAG ACGGCAGTGA ATTTGCCATT GAAGTGACCA TATCAAAAAT TCGTATTGCT
GATAATGTTG AATTTACTGC GGTTATCAGA GACATTTCTG AAAAAAATCA ATTACTAGAA
GAGTTAATCT TATCCTCAAG AAGAGATCCT TTAACGGAAC TGTACAACCG CCGATATTTT
ACCGAATTAC TCCATTCAGA AATTACTCGT TCTAGAAGAT TCAAACGAGG TTTCTCGCTG
TTAATGTTAG ATATTGACCA TTTTAAGTCA ATCAACGATA GGTATGGACA TGCCTGTGGA
GACGCTGCTT TAATCGCCTT TTCAAAAGCT GTGACCAACA GCATTAGGGA AGTAGATACT
ATTTGCCGAT GGGGTGGAGA AGAGTTTTTG GTACTCTTGC CAGAAATACC AAAAGTAACC
GCCATGGTTG TCGCTGAGAA AATCAGAAAA AACATTGAAA ACCTTGAAAC CATTTATGAA
GGTGATTTGA TAAAAGTTAC TGTATCTATT GGTTTAGAGT ACTTTTCTGG CGACGCTATT
GAAATGAGCA GCATGATCAA TAAAGTAGAT CAAATATTGT ATAGAGCAAA GGACACCGGA
AGAAATAAAA TATCCACTGA AATTTAG
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| Protein sequence | MFFLSDHDTL ISSIEAIGAS FAVFEFDPQS VAFELVSCNS RYEDLMGYSS AKALGQPLTT
IFPRYIHNPL KEAFIHCKNE RIALETEIVL DYKGQERCWR SIVSPIVNSA DEKFRIIQTC
VEITEKKVLE KQLNLSMKRF EAVVNNAYDG IITIDEQQNV KLFNEAAQSM FGYSEQEIMG
QPLTKLLPEK YQAKHHGYVE GFKRSQVDSR PMQTRAAVQG LRKDGSEFAI EVTISKIRIA
DNVEFTAVIR DISEKNQLLE ELILSSRRDP LTELYNRRYF TELLHSEITR SRRFKRGFSL
LMLDIDHFKS INDRYGHACG DAALIAFSKA VTNSIREVDT ICRWGGEEFL VLLPEIPKVT
AMVVAEKIRK NIENLETIYE GDLIKVTVSI GLEYFSGDAI EMSSMINKVD QILYRAKDTG
RNKISTEI
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