Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1313 |
Symbol | dnaK1 |
ID | 3521551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1352423 |
End bp | 1354324 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283777 |
Product | chaperone protein DnaK |
Protein accession | YP_268056 |
Protein GI | 71281082 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGA TTATTGGTAT AGATTTAGGT ACAACAAATT CATGTGTCGC GGTTATGGAA GGTGGCATTG CCAAAATTAT TGAAAATGCA GAAGGTAGCC GCACAACCCC ATCAATTGTT GCTTATGCAA ATAATGAAAC GTTAGCGGGT CAACCCGCAA AAAGACAGTC CGTGACCAAT TCTACCAACA CATTATTTGC GATTAAGCGA TTGATTGGTC GTAAATTTGA CGATAAAGAA GTGCAAAAAG ACATTAAGTT AGCGCCTTAT AAAATAGTAA AAGCGGACAA CGGTGATGCG TGGGTTGAGG TCGATGGTAA AGCATTGTCT CCACAAGAAG TGTCAGCACA AATTTTACGT AAATTGAAAA AAGATGCTGA AGCCTATTTA GGTGAAACGG TGACAGATGC GGTTATTACC GTGCCGGCAT ACTTTAATGA TTCGCAGCGT CAAGCAACCA AAGATGCAGG TAAAATTGCA GGACTTAATG TTAAACGTAT TATTAATGAA CCCACTGCCG CAGCATTAGC CTATGGCGTT GATAAAAATA GTAACGCTGA TCAAAAAGTG GTGGTTTACG ATTTAGGTGG CGGTACTTTT GATCTTTCAA TTATTGAAAT ATCCAATGTA GACGGTGAAA AACAATTTGA AGTATTAGCA ACCAATGGTG ATACCTTTTT AGGGGGTGAA GATTTTGATT TACGCTTAAT TAATTACCTT GCTGATGAAT TCAAAAAAGA AAGTGGTATT GATATTCATC AAGATACTTT AGCGTTGCAA CGCATTAAAG AAGCGGCTGA AAAAGCGAAG ATCGAGTTAT CATCGGCACT ACAAACAGAG GTGAATTTAC CGTACGTTAC GGCTGATGCC AGTGGTCCTA AACACTTAAA CGTAAAAGTT ACTCGAGCAA AATTAGAATC ATTAGTTGAT GATTTAGTAA AAAGCACCAT CGCACCGTGT GAACAAGCAT TAAAAGATGC TGGTTTAAGT AAAGCTGATG TTAGCGAGGT AATTTTGGTG GGTGGTCAAA CACGTATGCC AAAAGTGCAA GAAGCCGTTA AAACCTTCTT TTCTAAAGAA CCACGAAAAG ATGTGAACCC AGATGAAGCG GTTGCAATGG GTGCTGCAAT TCAAGCGGGG GTGATGTCAG GCGCTGTAGA TGATGTGTTA TTACTTGATG TAGCACCACT ATCACTCGGC ATTGAAACGT TAGGTGGTGT AATGACTAAA CTTATTGAAA AAAACACCAC TATACCAACC CGCGCTTCTG AAACGTTCTC TACGGCTGAA GACAATCAAG CTGCGGTAAC AGTACATGTG TTGCAAGGGC AACGTGAAAT GGCAACAGAT AATAAATCGT TGGGTCAATT TAACTTAACG GATATTAATC CAGGTCCACG AGGCTCAGTA CAAGTTGAAG TTACCTTTGA TATTGATGTT AATGGTATTT TGAATGTGTC AGCGAAAGAC AAAGCAACAG GCAAGGAGCA AAGCATTAAA ATTACCGCCT CAAGTGGCTT AACGGAAGAT GAAATTAATC GCATGGTGAA AGAGGCTGAA CTGCACGCGA GTGAAGACAA ACAAAAGCGT GAGTTAGTTG ATCAACGTAA CCAAGCAGAT CAATTAATTC ATACCGTGCA AACGTCAATG ACGAGTTTAG CTCAAGATCA ACAAACGGAG CTTAAAACAT TAATTGAGCA ACTGAAAATG GCAGTTAATG GCAGTGATAA AGCTGCAATT GAAATGCGTC AAAGTGCATT ACAAGAAGCT TATAGTAAAA CCATGCAAAC TGAACAAGCG CAATCGCAAC AAGCAGCTCA GCATCAAGGT AACGCTGCCA ATGATGGCGC TAAGGATGAA GATATAATTG ATGCTGATTT TGAAGACGTA AGCAACGGTT AA
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Protein sequence | MTKIIGIDLG TTNSCVAVME GGIAKIIENA EGSRTTPSIV AYANNETLAG QPAKRQSVTN STNTLFAIKR LIGRKFDDKE VQKDIKLAPY KIVKADNGDA WVEVDGKALS PQEVSAQILR KLKKDAEAYL GETVTDAVIT VPAYFNDSQR QATKDAGKIA GLNVKRIINE PTAAALAYGV DKNSNADQKV VVYDLGGGTF DLSIIEISNV DGEKQFEVLA TNGDTFLGGE DFDLRLINYL ADEFKKESGI DIHQDTLALQ RIKEAAEKAK IELSSALQTE VNLPYVTADA SGPKHLNVKV TRAKLESLVD DLVKSTIAPC EQALKDAGLS KADVSEVILV GGQTRMPKVQ EAVKTFFSKE PRKDVNPDEA VAMGAAIQAG VMSGAVDDVL LLDVAPLSLG IETLGGVMTK LIEKNTTIPT RASETFSTAE DNQAAVTVHV LQGQREMATD NKSLGQFNLT DINPGPRGSV QVEVTFDIDV NGILNVSAKD KATGKEQSIK ITASSGLTED EINRMVKEAE LHASEDKQKR ELVDQRNQAD QLIHTVQTSM TSLAQDQQTE LKTLIEQLKM AVNGSDKAAI EMRQSALQEA YSKTMQTEQA QSQQAAQHQG NAANDGAKDE DIIDADFEDV SNG
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