Gene CPS_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1313 
SymboldnaK1 
ID3521551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1352423 
End bp1354324 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content40% 
IMG OID637283777 
Productchaperone protein DnaK 
Protein accessionYP_268056 
Protein GI71281082 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGA TTATTGGTAT AGATTTAGGT ACAACAAATT CATGTGTCGC GGTTATGGAA 
GGTGGCATTG CCAAAATTAT TGAAAATGCA GAAGGTAGCC GCACAACCCC ATCAATTGTT
GCTTATGCAA ATAATGAAAC GTTAGCGGGT CAACCCGCAA AAAGACAGTC CGTGACCAAT
TCTACCAACA CATTATTTGC GATTAAGCGA TTGATTGGTC GTAAATTTGA CGATAAAGAA
GTGCAAAAAG ACATTAAGTT AGCGCCTTAT AAAATAGTAA AAGCGGACAA CGGTGATGCG
TGGGTTGAGG TCGATGGTAA AGCATTGTCT CCACAAGAAG TGTCAGCACA AATTTTACGT
AAATTGAAAA AAGATGCTGA AGCCTATTTA GGTGAAACGG TGACAGATGC GGTTATTACC
GTGCCGGCAT ACTTTAATGA TTCGCAGCGT CAAGCAACCA AAGATGCAGG TAAAATTGCA
GGACTTAATG TTAAACGTAT TATTAATGAA CCCACTGCCG CAGCATTAGC CTATGGCGTT
GATAAAAATA GTAACGCTGA TCAAAAAGTG GTGGTTTACG ATTTAGGTGG CGGTACTTTT
GATCTTTCAA TTATTGAAAT ATCCAATGTA GACGGTGAAA AACAATTTGA AGTATTAGCA
ACCAATGGTG ATACCTTTTT AGGGGGTGAA GATTTTGATT TACGCTTAAT TAATTACCTT
GCTGATGAAT TCAAAAAAGA AAGTGGTATT GATATTCATC AAGATACTTT AGCGTTGCAA
CGCATTAAAG AAGCGGCTGA AAAAGCGAAG ATCGAGTTAT CATCGGCACT ACAAACAGAG
GTGAATTTAC CGTACGTTAC GGCTGATGCC AGTGGTCCTA AACACTTAAA CGTAAAAGTT
ACTCGAGCAA AATTAGAATC ATTAGTTGAT GATTTAGTAA AAAGCACCAT CGCACCGTGT
GAACAAGCAT TAAAAGATGC TGGTTTAAGT AAAGCTGATG TTAGCGAGGT AATTTTGGTG
GGTGGTCAAA CACGTATGCC AAAAGTGCAA GAAGCCGTTA AAACCTTCTT TTCTAAAGAA
CCACGAAAAG ATGTGAACCC AGATGAAGCG GTTGCAATGG GTGCTGCAAT TCAAGCGGGG
GTGATGTCAG GCGCTGTAGA TGATGTGTTA TTACTTGATG TAGCACCACT ATCACTCGGC
ATTGAAACGT TAGGTGGTGT AATGACTAAA CTTATTGAAA AAAACACCAC TATACCAACC
CGCGCTTCTG AAACGTTCTC TACGGCTGAA GACAATCAAG CTGCGGTAAC AGTACATGTG
TTGCAAGGGC AACGTGAAAT GGCAACAGAT AATAAATCGT TGGGTCAATT TAACTTAACG
GATATTAATC CAGGTCCACG AGGCTCAGTA CAAGTTGAAG TTACCTTTGA TATTGATGTT
AATGGTATTT TGAATGTGTC AGCGAAAGAC AAAGCAACAG GCAAGGAGCA AAGCATTAAA
ATTACCGCCT CAAGTGGCTT AACGGAAGAT GAAATTAATC GCATGGTGAA AGAGGCTGAA
CTGCACGCGA GTGAAGACAA ACAAAAGCGT GAGTTAGTTG ATCAACGTAA CCAAGCAGAT
CAATTAATTC ATACCGTGCA AACGTCAATG ACGAGTTTAG CTCAAGATCA ACAAACGGAG
CTTAAAACAT TAATTGAGCA ACTGAAAATG GCAGTTAATG GCAGTGATAA AGCTGCAATT
GAAATGCGTC AAAGTGCATT ACAAGAAGCT TATAGTAAAA CCATGCAAAC TGAACAAGCG
CAATCGCAAC AAGCAGCTCA GCATCAAGGT AACGCTGCCA ATGATGGCGC TAAGGATGAA
GATATAATTG ATGCTGATTT TGAAGACGTA AGCAACGGTT AA
 
Protein sequence
MTKIIGIDLG TTNSCVAVME GGIAKIIENA EGSRTTPSIV AYANNETLAG QPAKRQSVTN 
STNTLFAIKR LIGRKFDDKE VQKDIKLAPY KIVKADNGDA WVEVDGKALS PQEVSAQILR
KLKKDAEAYL GETVTDAVIT VPAYFNDSQR QATKDAGKIA GLNVKRIINE PTAAALAYGV
DKNSNADQKV VVYDLGGGTF DLSIIEISNV DGEKQFEVLA TNGDTFLGGE DFDLRLINYL
ADEFKKESGI DIHQDTLALQ RIKEAAEKAK IELSSALQTE VNLPYVTADA SGPKHLNVKV
TRAKLESLVD DLVKSTIAPC EQALKDAGLS KADVSEVILV GGQTRMPKVQ EAVKTFFSKE
PRKDVNPDEA VAMGAAIQAG VMSGAVDDVL LLDVAPLSLG IETLGGVMTK LIEKNTTIPT
RASETFSTAE DNQAAVTVHV LQGQREMATD NKSLGQFNLT DINPGPRGSV QVEVTFDIDV
NGILNVSAKD KATGKEQSIK ITASSGLTED EINRMVKEAE LHASEDKQKR ELVDQRNQAD
QLIHTVQTSM TSLAQDQQTE LKTLIEQLKM AVNGSDKAAI EMRQSALQEA YSKTMQTEQA
QSQQAAQHQG NAANDGAKDE DIIDADFEDV SNG