| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1296 |
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| Symbol | |
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| ID | 3520898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1337863 |
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| End bp | 1338768 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283760 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_268039 |
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| Protein GI | 71280432 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAAC TTGAAGATAT GTATATTTTT CTGCGTGTTG TTGAAACGGG CAGTATTACC
AAAGCAGCAG AACAGATGAA TATCGCTAAG TCTGCGGTAA GTAAGCGCTT ATCTTTGTTA
GAGCAAAAAC TGGGTATTAA GTTAATCAAT CGTACCACTC GAAAGTCCAG TATTACCGAA
GCAGGTCAGC GTTATTACCA ACGCAGTAAA CTTATTATTG ATGAAGTGGA TGAATTAAAC
AGCCAAACTT CTAGCAGTAA AAGAGCATTA GAGGGCACAC TAAATATTGC GGTGCCGTTA
TCGTTTGGGC TGACTCACTT GGCACCGGCA CTTGATTTGT TTTTGCAGCA GCATAGCGAT
TTAAAGTTAA ACATTAATTT CTCCGATCAA AAAATAGATA TTGTTGAGCA GGGCGTCGAT
TTAGCTTTTC GCATTGGCCA GTTAGATAAT TCGAGCTTGC AAGCTCGAAA AATTGCGCCG
ATAAAACATG TGTTATGTGC GAGTCCTGAG TACTTAAAAT TACAGGGAGA GCCAAAAACG
CCAAATGATT TGAAAAACCA TAAAGTGATT AAATATGGCA ATTTAGACCA AGGCGGTCTG
AAATTATTGA ATAAAGAGGG TGAAGAACAT ATTGTGCATT TTGAGCCGCA TATTATTGCC
AATAATGGCG ATTTTCTTAA GTCATTGGCG GAATCAAATC ACGGTATCAC CTATTTACCT
AGTTTCATTG TCTGGCAGTC TTTAGCCACT AAAAAACTTG TTCCAGTATT AGCAGATTAT
AAAATAGAAA GTATGCATGC CTACGCTGTT TACCCGCCGA ACAGACACTT ACCGCTTAAA
GTGCGTAGTT TGATCGATTT TTTGGTTGAA CGCTTTGGTA ACGATCCTTA TTGGGATCAG
TATTGA
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| Protein sequence | MGQLEDMYIF LRVVETGSIT KAAEQMNIAK SAVSKRLSLL EQKLGIKLIN RTTRKSSITE
AGQRYYQRSK LIIDEVDELN SQTSSSKRAL EGTLNIAVPL SFGLTHLAPA LDLFLQQHSD
LKLNINFSDQ KIDIVEQGVD LAFRIGQLDN SSLQARKIAP IKHVLCASPE YLKLQGEPKT
PNDLKNHKVI KYGNLDQGGL KLLNKEGEEH IVHFEPHIIA NNGDFLKSLA ESNHGITYLP
SFIVWQSLAT KKLVPVLADY KIESMHAYAV YPPNRHLPLK VRSLIDFLVE RFGNDPYWDQ
Y
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