| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1274 |
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| Symbol | gcvT |
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| ID | 3522650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1308798 |
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| End bp | 1309886 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283738 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_268017 |
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| Protein GI | 71282177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0243326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAATA AAACAGTATT ACATGCAAAG CATTTAGCTT CAGGCGCAAA AATGGTTGAT
TTCTTTGGCT GGGATATGCC TATCAACTAC GGCTCTCAAA TTGAAGAGCA TCACGCAGTA
AGAACCGATG CCGGCATGTT TGATGTTTCA CACATGACGA TTGTTGATGT GCAAGGCGCA
GATGCAAAAG CTTTCTTACG TCGTTTAGTA ATTAACGATG TTGCTAAGTT AGCAACACCG
GGTAAAGCGT TATACACAGG TATGTTAAAT GAAGAAGGCG GCGTGATTGA TGATTTAATC
ATCTACTTCT TCTCAGATAC TGATTACCGT TTAGTTGTTA ACTCAGCGAC ACGTGTAAAA
GATCTTGCTT GGATGACTAA GCAATCTACA GGTTTTGATA TCACTATCAC TGAACGTCCT
GAATTTGGCA TGCTTGCCGT ACAGGGCCCA GAAGCGAAAG CAAAAGTAGC TAAACTATTA
ACAGCAGAGC AAATCGAAGC TGTTGAAGGC ATGAAACCTT TCTTTGGTGT GCAAGTAGGT
GATTTATTTA TTGCCACTAC AGGTTATACT GGTGAAGACG GTTACGAAAT TATAGTACCA
AATAATTCAG CTGAAGATTT TTGGCAAAAA CTATTAGACG AAGGTGTAGT TCCTTGTGGT
CTAGGTGCTC GTGATACACT ACGTTTAGAA GCTGGCATGA ACCTTTACGG TTTAGATATG
GATGAAACTG TTTCGCCATT AGCCGCTAAC ATGGCGTGGA CAATCAGCTG GGAACCTACA
GACCGTGACT TTATCGGTCG TGACGTATTA ACAGCTCAAA AAGCAGCGGG TGATCAACCT
AAGCTTGTTG GTTTAGTACT AGAAGCAAAA GGTGTGCTTC GTTCACATCA AGTTGTTGTG
ACTGAATTTG GCAATGGTGA AATTACTTCT GGCACGTTCT CGCCAACGTT AGGCCACAGT
GTTGCTTTAG CACGTGTTCC ACGTAGCGTG AAAGTAGGCG ATACAATCGA AGTTGAAATG
CGTAAAAAAC TGATTAAAGT TCAGGTTACA AAACCTAGTT TCGTTCGTAA CGGCAAAAAA
GTTTTCTAA
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| Protein sequence | MTNKTVLHAK HLASGAKMVD FFGWDMPINY GSQIEEHHAV RTDAGMFDVS HMTIVDVQGA
DAKAFLRRLV INDVAKLATP GKALYTGMLN EEGGVIDDLI IYFFSDTDYR LVVNSATRVK
DLAWMTKQST GFDITITERP EFGMLAVQGP EAKAKVAKLL TAEQIEAVEG MKPFFGVQVG
DLFIATTGYT GEDGYEIIVP NNSAEDFWQK LLDEGVVPCG LGARDTLRLE AGMNLYGLDM
DETVSPLAAN MAWTISWEPT DRDFIGRDVL TAQKAAGDQP KLVGLVLEAK GVLRSHQVVV
TEFGNGEITS GTFSPTLGHS VALARVPRSV KVGDTIEVEM RKKLIKVQVT KPSFVRNGKK
VF
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