Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1272 |
Symbol | ubiH |
ID | 3520321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1305439 |
End bp | 1306752 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283736 |
Product | 2-octaprenyl-6-methoxyphenol hydroxylase |
Protein accession | YP_268015 |
Protein GI | 71279860 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA GTAACCAACA TTTTGATGTC ATTATCTCAG GCGGCGGCTT ATCTGGTAGC CTAATGGCGT TAAGTTTAAG TCAACTTTCT AAAGCCGATG GTAGTTTACT ATCCATCGCG ATTATTGAAG CCCAAGCTTT TAATCAAACC AGTTCAGCAG CTGAGACCTC CCTTTTTGAT GAACGTGTTT TAGCACTCTC TCACGGTAGC GCTAAATACC TAGCTAAGCT GGGTGCATGG CAATATCTAA AAGATGATGC CAGTGCCATT ACGGATATTG ATATTTCTGA TCGTGGTCAC TTTGCCAAAG CAAGGTTAAC GGCAAAGGAA TATGACGTTA ATGCCCTTGG TTATGTCATC GAAATGGCAC TTATTGGTAA AGCGCAACTA AAAGCACTAA GTGACCATAC GACTAATGTC AAAAATAGCA GTGCAACAAA TAGCACAGCG ATAAAAAAGA ACATTCACTG GTTTAGCCCT GACTCAATAG CTGACATTAC TTGGCAAGAA CGCAACAAGA GTGCAGCTGA CAAAACGCAG GTAAAGGTTA CGCTTAATTC AGGTGAAACC TTGTCAGCAA AGCTACTACT TGGTTGTGAT GGTGCTCATT CCCCAGTAAG AAAGCTTGCC AATATTGACG TCACTTGTGA TGATTATCAG CAAGTTGCCT TAATTGCTAA TGTTTCAACC AGCAAAGCAC ATCATCATAA AGCCTTTGAA CGGTTTACTC CGTTTGGCCC CATTGCCATG TTGCCGTTAA AATCATTAAA GACAAAATCC TCAGCTGCTG GCGCATCACG TTGTTCACTT GTTTGGACTA TGACGCCAGA GCAAGCAGCA GAAATTAAAC ACTTAAGCGA TGATGATTTT AAAGTTGAGT TAGAGCGCGC ATTTGGTAGC TACCTCGGCG CAATCACCCA TGTGGGTAAA CGTGATACTT ATCCCTTGGT GTTATTACAA GCACAACAGC AAACCTATCA CCGCATGGCG TTGGTGGGAA ATGCCTCACA TACAATTCAC CCCATTGCAG GGCAAGGTTT TAACCTAGGC TTACGTGATG TTGAGGTGAT GACTGACCTA GTTAAAAACG CCTTAGCAGC AGGACAAGAT ATTGGTAATT TTGCCTTATT ACATAGTTAT CAAATGAATA GAGCGAAAGA TCAGCAGCAA GTTATTCAAT TAACAGATTC ATTGGTGACA TTATTCGCTA ATGATTTACC GCCATTAGTC GTTGGCCGAA ATATTGGCTT ACAAGCACTT AATATTATGT CGCCGTTAAA AAATGCTTTA GTTAAGAAGA CCATGGGTTA TTAA
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Protein sequence | MENSNQHFDV IISGGGLSGS LMALSLSQLS KADGSLLSIA IIEAQAFNQT SSAAETSLFD ERVLALSHGS AKYLAKLGAW QYLKDDASAI TDIDISDRGH FAKARLTAKE YDVNALGYVI EMALIGKAQL KALSDHTTNV KNSSATNSTA IKKNIHWFSP DSIADITWQE RNKSAADKTQ VKVTLNSGET LSAKLLLGCD GAHSPVRKLA NIDVTCDDYQ QVALIANVST SKAHHHKAFE RFTPFGPIAM LPLKSLKTKS SAAGASRCSL VWTMTPEQAA EIKHLSDDDF KVELERAFGS YLGAITHVGK RDTYPLVLLQ AQQQTYHRMA LVGNASHTIH PIAGQGFNLG LRDVEVMTDL VKNALAAGQD IGNFALLHSY QMNRAKDQQQ VIQLTDSLVT LFANDLPPLV VGRNIGLQAL NIMSPLKNAL VKKTMGY
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