Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1202 |
Symbol | yegQ |
ID | 3521670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1233435 |
End bp | 1234826 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283666 |
Product | U32 family peptidase |
Protein accession | YP_267945 |
Protein GI | 71281199 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0162045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAC CTGAACTTCT CTCTCCTGCC GGTAGTTTAA AAAATATGCG GTATGCTTTT GCTTACGGCG CAGATGCTGT TTATGCTGGC CAGCCTCGTT ATTCCTTAAG AGTTAGAAAC AATGAATTCA GTTTAGAGAA TATTCAAATT GGTATAAATG AAGCACACCA ATTAGGTAAA AAGTTCTATC TCGTTAACAA TATCGCACCA CACAACGGAA AACTAAAAAC CTTCCTTAAA GATATTGCAC CTATTGTTGC CATGAAGCCA GACGCATTAA TTATGTCGGA TCCCGGCCTT ATTATGTTGG TAAGAGAGAA CTTTCCTGAC ATGGCAATAC ACTTGTCAGT ACAAGCCAAT GCAGTCAATT GGGCAACAGT TAAGTTTTGG CAACAACAAG GCGTTGAACG AGTAATACTA TCCAGAGAAC TTTCCCTTGA TGAAATTGAA GATATTCGTT TTCATTGTCC AGAAATGGAA TTAGAAGTAT TTGTCCATGG CGCGCTTTGC ATGGCATATT CTGGTCGCTG TCTACTCTCT GGTTATATCA ACAAAAGAGA TCCTAACCAA GGAACATGCA CTAACTCTTG TCGTTGGAAA TATGATATTC ATGAAGCTAA GGAAACAGAA ACTGGCGATA TTATTGCAGT AAAACCTGAG CCTGTTGAAG TTTATATGCC TGAGAAAGAG ATCATTATAC CTGAGCAAAA ACCTATTGAT GATGTCATTT TACTGCAAGA ACAAGGTCGC CCTGGCGAAT ATATGCCTGC TTTTGAAGAT GAGCATGGCA CATATATCAT GAATTCAAAA GATCTGCGTG CTGTTGAGCA TGTTGAACGC TTGGTTAAAA TGGGTGTTCA CTCCTTAAAA ATTGAAGGCC GAACTAAATC CTTCTATTAC TGCGCAAGAA CAGCGCAGGT ATATGGTAAG GCGATTAATG ATGCGATTGC AGATAGAGCA TTTAATCCAA GCCTTAATAC CGATTTGGAG CATCTAGCGC ATCGTGGTTA TACTGAAGGT TTTTTAAAGC GACATCGCCC TAGTGATACT CAAAACTATG AGTATGGTTA CTCAAAAAGT GACACTCAAC AATTTGTTGG GGAAGTGCTA GGACGAAATG AAATAAATGG TCTAATACAA ATTGACGTTA AAAATAAGTT TCTTGTTGGT GACCAACTTG AGTTGATGAC ACCTAAAGGC AACCAGACCT TTACATTAAA CAAGATGATC CATAGTAAAA CGGGTGAAAG CATTGATGAT GCTAAGGGCT CTGGTCATAA GGTAGAAATT GAGCTTGATA CTGAATTAGA ACTAGATTTT GGTATTATCA TGCGTTATTT AGATGAAGGT GGCACTACCC GTCACCCATT CGCACAAAAC CAAAAAACTT AG
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Protein sequence | MIKPELLSPA GSLKNMRYAF AYGADAVYAG QPRYSLRVRN NEFSLENIQI GINEAHQLGK KFYLVNNIAP HNGKLKTFLK DIAPIVAMKP DALIMSDPGL IMLVRENFPD MAIHLSVQAN AVNWATVKFW QQQGVERVIL SRELSLDEIE DIRFHCPEME LEVFVHGALC MAYSGRCLLS GYINKRDPNQ GTCTNSCRWK YDIHEAKETE TGDIIAVKPE PVEVYMPEKE IIIPEQKPID DVILLQEQGR PGEYMPAFED EHGTYIMNSK DLRAVEHVER LVKMGVHSLK IEGRTKSFYY CARTAQVYGK AINDAIADRA FNPSLNTDLE HLAHRGYTEG FLKRHRPSDT QNYEYGYSKS DTQQFVGEVL GRNEINGLIQ IDVKNKFLVG DQLELMTPKG NQTFTLNKMI HSKTGESIDD AKGSGHKVEI ELDTELELDF GIIMRYLDEG GTTRHPFAQN QKT
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