| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1189 |
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| Symbol | fadD1 |
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| ID | 3518660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1215202 |
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| End bp | 1216857 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283653 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_267932 |
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| Protein GI | 71277782 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAGA TTTGGTTAGA AAAAAGTTAC CCTAGTGATG TGCCGTTTGA AATAGATGCG
GATAAATATC CATCCATTGT GGCTATGTTC ACAAAATACT CTACTCAGTT TAGTGACAAA
ACAGCTTTCA TCAATATGGG CGCTTCTATT TCTTATGCAG AACTTTCAGT TCAAGCAACC
GCCTTTGCAG CATACTTACA ACAAGATTTA GGTTTAGAGC GAGGTGATAA ATTCGCCATC
ATGGTGCCTA ATTGCTTACA ATACCCAATA GCATTATTTG GCGCTTTATT AGCAGGGCTT
ACTGTTGTAA ACGTAAATCC TTTATATACA GCCCGTGAAC TTGAGCACCA ATTAAAAGAC
TCAGATGCTA AAGCAATGTT GATTATAGAA AACTTTGCTC AAACTCTTGA GAAGGTAGTT
GATAAAACAG CGGTTAAACA TGTCATCATG ACATCTTTAG GTGATCGATT GGGCCTAGTT
AAGGGCACTG TTGTCAATTG CATGGTCAAA TACGTTAAAA AAATGGTACC TGCTTTTAAA
CTGCCACACG CGGTACGTTT TAATACTGTT TTATCGCGAG GCTTAGCACT TAAATTATCG
CCGGTAGAGT TGTGTGGAGA TGATCTCGCA TTTTTGCAAT ATACCGGTGG TACAACAGGT
TTATCTAAAG GCGCCATGTT AACGCATCGA AACATGGTGG CAAACTTACA GCAAGCTAAA
GCTGCTATTT TCCCATTGTT AGAAGAGGGC AATGAGCTAG TGGTAACAGC GTTACCGCTT
TATCATATCT TTGCTTTGAC GGCGAATTGT TTAACGTTCT TTACCATGGG GGGCACTAAT
TTATTAATTA CCAACCCAAG AGATATGCCT AATTTTGTAA AAGAATTATC AAAATACCCA
TTTACAGCCA TTACGGGTGT AAATACCTTA TTTAACGGCT TATTGAATAC GCCTGGCTTT
AGTGAACTAA ACTTCAGCAC GTTGAAAATG TCACTTGGTG GTGGAATGGC TGTACAACGA
CCTGTTGCAG AGCGTTGGCA GCAAATAACG GGTACCAGAT TGTTAGAAGG TTATGGTTTA
ACTGAGTGCG CACCTTTAGT GACGATAAGC CCTTATAATC TTGCCGCTTA TGACGGAAGT
ATAGGTCTTC CTGCGGCTTC AACGGATGTT AAAATCATGC GTGAAGATGG TAGTGAAGCT
GATATTGGCG AATCAGGTGA AATGTGGGTT AAAGGCCCTC AGGTAATGCT AGGTTATTAC
AAGTGTGTAG AAGCGACTGA AGAAGTATTG AAAGACGGTT GGTTTGCTAC AGGTGATGTT
GCCATGATGG ATGATAAAGG TTTCTTCACT ATCGTTGATC GTAAAAAAGA TATGATAATC
GTTTCTGGCT TTAATGTTTA TCCCAATGAA ATTGAAGAAG TGCTTGCCAT GCATGAAGGC
GTCTTAGAAT CTGCGGCCAT TGGTGTACCC CATGAAGTTT CAGGCGAGGT TGTCAAAATT
TTTGTGGTAA AAAAATCAGA TGATTTAGAT GAAAAAACGC TTATCAAACA TTGTCGCGAA
AACCTGACTA ATTACAAAGT GCCAAAACTG GTTGAGTTTC GAAAAGAATT ACCTAAAACC
AATGTAGGTA AAATTTTAAG AAGAGAGTTA CGCTAA
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| Protein sequence | MEKIWLEKSY PSDVPFEIDA DKYPSIVAMF TKYSTQFSDK TAFINMGASI SYAELSVQAT
AFAAYLQQDL GLERGDKFAI MVPNCLQYPI ALFGALLAGL TVVNVNPLYT ARELEHQLKD
SDAKAMLIIE NFAQTLEKVV DKTAVKHVIM TSLGDRLGLV KGTVVNCMVK YVKKMVPAFK
LPHAVRFNTV LSRGLALKLS PVELCGDDLA FLQYTGGTTG LSKGAMLTHR NMVANLQQAK
AAIFPLLEEG NELVVTALPL YHIFALTANC LTFFTMGGTN LLITNPRDMP NFVKELSKYP
FTAITGVNTL FNGLLNTPGF SELNFSTLKM SLGGGMAVQR PVAERWQQIT GTRLLEGYGL
TECAPLVTIS PYNLAAYDGS IGLPAASTDV KIMREDGSEA DIGESGEMWV KGPQVMLGYY
KCVEATEEVL KDGWFATGDV AMMDDKGFFT IVDRKKDMII VSGFNVYPNE IEEVLAMHEG
VLESAAIGVP HEVSGEVVKI FVVKKSDDLD EKTLIKHCRE NLTNYKVPKL VEFRKELPKT
NVGKILRREL R
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