| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1166 |
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| Symbol | |
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| ID | 3520614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1188680 |
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| End bp | 1189510 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283630 |
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| Product | putative vitamin B12 transport ATP-binding protein BtuD |
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| Protein accession | YP_267909 |
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| Protein GI | 71280150 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.468222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACTC TGCTAAATAT CTCTGGGCTC AGCTGGAAAG TTCTAAATAA AACGATCTTG
CAAGACATTA ATTTTACTGT CCGCAAAGGT GAAGTGATCG GTATTATTGG CCCTAATGGT
GCAGGTAAAA CCAGCTTATT ACGTTGTATA ATCAACCAAG CCAATATTCT TGCCAGTGCA
AACGTTAGCG GCTGTGTACA TCTTAAAAAT CGTCTTATAA CACAATTCAG TGCTAAAGAA
ATTGCTCAAC ACTTCGCTTT AGTTATGCAA AAAAATGACT CTATCTTTGC TTTATCAGTA
CAAGACGTGA TGAAAATGGG TCTATTACCG CACAAAAGTT TGTTTTCACT CGATAGTGAT
TATGATAAGT CTCAGATTGA ATTAGCCCTA AGTAAAGTAG GATTAAGTCA CGCCCTAGAG
AGTCTATTTA ATCAACTCTC TGGCGGTGAA CAGCAACGCG TATTAATTGC TCGAGCACTG
GTACAGGCTA GCCAAATATT AATTCTTGAT GAGCCGACCA ATCACCTTGA TGTTTATTAC
CAGCATCAAG TATTACAGTT AGTAAATAAG CTCAATATTA CCGTGATTAT GACAGTACAT
GATCTCAATT TAGCCAGTTT ATACTGCCAG CGATTGTTGC TATTAGATAA AGGCCAATTA
ATTTGCGATG GTTCCCCTAA AGAAGTTTTG GCTCCAGAGC AACTAAGCAG AATTTTTGGC
TTACCCTGTC AGCAGAATGT TGATGTTATC ACTGGTGCCA CTCAAGTCTC TTTTTATCTT
GAAGAAAACA GCATGCAATA CAGCGCCATT TCGGAGCCTT TAAGTGAATA A
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| Protein sequence | MSTLLNISGL SWKVLNKTIL QDINFTVRKG EVIGIIGPNG AGKTSLLRCI INQANILASA
NVSGCVHLKN RLITQFSAKE IAQHFALVMQ KNDSIFALSV QDVMKMGLLP HKSLFSLDSD
YDKSQIELAL SKVGLSHALE SLFNQLSGGE QQRVLIARAL VQASQILILD EPTNHLDVYY
QHQVLQLVNK LNITVIMTVH DLNLASLYCQ RLLLLDKGQL ICDGSPKEVL APEQLSRIFG
LPCQQNVDVI TGATQVSFYL EENSMQYSAI SEPLSE
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