Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1123 |
Symbol | secF |
ID | 3521700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1146575 |
End bp | 1147522 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637283587 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_267866 |
Protein GI | 71281229 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT TACAATTAAA AGAAACTGTC AACTTTATGA GCTATCGCAA GATAGCCTTA GTATTTAGCG CCTTATTAAT GATTGCTTCA ATCTTCTCTC TAGCCACTAA TAAACTGAAC TTTGGTTTAG ATTTTACTGG CGGTACTTTG ATTGAAGTTG GTTTTCAAGA AGCAGCAGAT TTAGAAAAGC TTCGTTTAGT GATGAAAACT AATGGCTTTG CTGATGCGAA AGTGCAATTT TATGGTAGTA GCCGTGATGT TGTGATTCGT TTAGGTTTAC GTGATGACGT TAAAGCTGAA ATGCTTGGCA ATGAAGTACT TGATGTCTTA CAAGGAGCGA CTGGCCAAAC GGTTGATATG CGTCGTATTG AGTTTGTTGG CGCAAGCGTT GGTGATGAGT TAGCAGAGCA GGGTGGTTTA GCTATGCTAA CAGCGCTGAT CTGTATTTTG ATTTACGTTG CTTTTCGATT TGAATGGCGC TTTGCTGTAG GCTCAGTGGT AGCGTTATTT CACGATGTAT TATTAACACT TGGTTTGTTT TCAATTTTAC AACTAGAGTT TGATTTAACT GTACTTGCAG CGATATTAGC TGTGATAGGT TACTCACTTA ACGATACTAT TGTTGTTTCA GACCGTATTC GTGAAAACTT TAGAAAAGTG CGCAACAGTG AAGCTGAAGA AATAATTAAT ATCTCTTTAA CGCAAACATT AAGTCGAACT TTTATTACCT CAATTACCAC ACTATTAGTT CTAGCTGCTT TGTTCTTTCA AGGTGGAGCA CTGATTCATG GTTTTGCCAC GGCATTATTA TTCGGTGTTT TTGTTGGTAC TTACTCTTCA ATTTATGTTG CTAGTTTAGT GGCATTATCT CTAGGTATTT CAAAAGAAGA TTTAATACCT GAAGTCATTG AAAAAGAAGG TGCAGATCAA GAAGCTATGA TGCCTTAA
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Protein sequence | MQILQLKETV NFMSYRKIAL VFSALLMIAS IFSLATNKLN FGLDFTGGTL IEVGFQEAAD LEKLRLVMKT NGFADAKVQF YGSSRDVVIR LGLRDDVKAE MLGNEVLDVL QGATGQTVDM RRIEFVGASV GDELAEQGGL AMLTALICIL IYVAFRFEWR FAVGSVVALF HDVLLTLGLF SILQLEFDLT VLAAILAVIG YSLNDTIVVS DRIRENFRKV RNSEAEEIIN ISLTQTLSRT FITSITTLLV LAALFFQGGA LIHGFATALL FGVFVGTYSS IYVASLVALS LGISKEDLIP EVIEKEGADQ EAMMP
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