| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1118 |
|---|
| Symbol | aceK |
|---|
| ID | 3522013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1139645 |
|---|
| End bp | 1141414 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637283582 |
|---|
| Product | bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
|---|
| Protein accession | YP_267861 |
|---|
| Protein GI | 71281541 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4579] Isocitrate dehydrogenase kinase/phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.53006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATG AACTTGCGCT TACTATAGCC AATACAATTA TTAATGGTTT TGAACGCCAT
TTTGCAATTT TTACCGAAAT TACTCAATCT GCCCGAAATC GATTTCAACA ATGTCAATGG
AATGAAATTC ATCGCTCTGC TAGGGCAAGA ACCAATTTTT ATGACGAACG TGTAAAAGAA
ACATTCAACG ATATAAAAGA AGACTTTAAT ATTAGCTCGC TTGATGATGC GTTATGGCAA
CGAGTTAAAG CCGTCTACTC TGATTTATTA ATCAATCATA AACAACCAGA ATTAGCTGAA
ACCTTTTATA ACTCGGTTTT TTGTCACTTA TTCGAGCGTA AGTATTATCA CAACGATTAT
ATCTATGTCG AGAGTACCGC GCACCGACTT GATGATAAAA CACAGCCGGA AATCTATACT
TCTTATCAGC CAAAAGAACT TGGCTTAAAA CAAACGATTT GTGACATTAT GAATAGTCAT
AGAACGGTGA TCCCATTTGA AGATCTCGAT CGTGATGTTG ATGCGCTTAT TAATACTTTT
CGCCGAAAAG CACATAAAAC CCGTGTTAAA TTAGAAGATT TGAAGTTTGA TATTCTTAAC
TTTACCTTTT ATCGAAATAA AGGTGCTTAC CTCATTGGCC GGGTATTATC GCCAGCGGGA
GAAACACCAT TTATTATTGC GGTGCTTAAT AATGAAAAGG GTGGTTTGTA TATAGATGCA
TTACTCACCA GTAGTGAAAG TATGGCGGTT GTTTTTGGTT TTGCTCGCGC TTACTTTTTT
GTTGACTGTG AACATCCTTA TGCGCTGGTT AACTTCTTAC AAGGGCTAAT GCCCCATAAA
ACCAAAGCTG ATTTATATTC TGCTATTGGA TTTCATAAAC AAGGAAAAAC ACAGTTTTAT
CGAGATTTTC TCAACCACCT CGATAGCAGT GATGACCAAT TTGAATTAGC TGCTGGTATT
AAAGGTATGG TGATGTCTGT ATTTACGCTG CCCTCATACC CTTATGTTTT TAAAATCATC
AAAGATAAGT TTTCACCCAG TAAAAACATA ACCAAAAAAG ATGTAAAAGG AAAATATCGT
TTAGTTAAGT TACACGATAG AGTCGGTCGG ATGGCCGATA CTATGGAATA TTCAGAAGTA
GCCTTTCCTA AGTCGCGTTT TAACGATGAG CTTTTGGCTG AACTTCAAAA AGTAGCACCA
TCAATCATTC GCTATGAAGG TGAAGGCGAA GAAGCTCTTA TTATTATTGA GCATTTATAT
ATAGAGCGCC GAATGGTGCC ACTTAATTTA TACCTAATGG ATGCCCTTAA AAATAAAGCA
CAGCAAAAAA TTGATGACGC CTTATTCGGC TATGGTCAAG CCATTAAACA GCTAATCTCC
GCAGATATTT TTCCTGGCGA CATGTTACTC AAAAACTTTG GTGTGACACG CCATGGACGG
GTGATTTTTT ATGATTATGA CGAAATAGCT TATATGAATG AAATCAACTT TAGAGTAAAA
CCTAAAGCGG TGACTGAAGA ACAATTATAT GCGGCTGAAC CTTGGTATAG CGTAATGCCT
GGAGATATGT TCCCAGAGGA GCTCGCTACG TTTGCACTCG CAAATCCAAG TTACCTCAAA
GCATTTAAAA TACACCACGA AGATTTATTA ACAGCGGCAT ATTGGCAACA ATGCCAACAA
GATGTCGCCA ATGGTATTTA TAAAGATGTT TTTCCTTATC CTGATAAATA TCGCTTTTGT
AATTTAAGTT TTGGTAGCAT TAAAAGATAA
|
|---|
| Protein sequence | MKDELALTIA NTIINGFERH FAIFTEITQS ARNRFQQCQW NEIHRSARAR TNFYDERVKE
TFNDIKEDFN ISSLDDALWQ RVKAVYSDLL INHKQPELAE TFYNSVFCHL FERKYYHNDY
IYVESTAHRL DDKTQPEIYT SYQPKELGLK QTICDIMNSH RTVIPFEDLD RDVDALINTF
RRKAHKTRVK LEDLKFDILN FTFYRNKGAY LIGRVLSPAG ETPFIIAVLN NEKGGLYIDA
LLTSSESMAV VFGFARAYFF VDCEHPYALV NFLQGLMPHK TKADLYSAIG FHKQGKTQFY
RDFLNHLDSS DDQFELAAGI KGMVMSVFTL PSYPYVFKII KDKFSPSKNI TKKDVKGKYR
LVKLHDRVGR MADTMEYSEV AFPKSRFNDE LLAELQKVAP SIIRYEGEGE EALIIIEHLY
IERRMVPLNL YLMDALKNKA QQKIDDALFG YGQAIKQLIS ADIFPGDMLL KNFGVTRHGR
VIFYDYDEIA YMNEINFRVK PKAVTEEQLY AAEPWYSVMP GDMFPEELAT FALANPSYLK
AFKIHHEDLL TAAYWQQCQQ DVANGIYKDV FPYPDKYRFC NLSFGSIKR
|
|---|
| |