Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1100 |
Symbol | metA |
ID | 3522343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1118313 |
End bp | 1119260 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637283564 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_267844 |
Protein GI | 71281871 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.237834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCATTA AAATTCCCGA CCAATTACCA GCGTTATCAA TTTTAGATAA TGAAAATATT TTTGTTATGT CTGAGAACCG AGCAGCATCT CAAGAAATTC GTCCAATGCA AGTCGCTATT CTCAACTTAA TGCCGAATAA AATTGAAACT GAAGTGCAGA TATTGCGCAT GCTGTCTAAT ACACCGTTAC AGATAAATAT TGAATTTATT CGTATACATA AAAATGTGTC CAAAAATACG CCAGAAGAGC ATCTAGAAAA CTTTTACCAT TTGTTTGATG ATATAAAACA CAAACAATAC GATGGTCTAA TCATCACAGG TGCTCCGCTA GCTTTGCTTG ATTATTCGCA AGTGAAATTT TGGGATAAAA TTTGTGAAGT GTTTGATTGG GCAGAAAAAA ATGTAACTTC AACCATGTTC TCATGTTGGG CTGCACACGC TGCGTTATAT CATCACTACG GTTTAAACCG TCATTTGCGC AAAGAAAAAC TTTCTGGTGT GTTTAAACAC AAACCGCTTG ATGATAAAGA GTCATTAACG AGAGGATTTG ATGAAAACTT TAATGTGCCA CATTCTCGTT ATGGTTACAT TGATAAATCA GATTATGAAA GCATTCCTCA AATACAGATA TTAGCTGAAT CTGCTGATGC AGGTGTATAT TTAGCTGCCA GTAAAAACAA ACAGCAAGTG TATTTGACGG GTCATCCTGA ATACGATGCA AGCACATTGC ATGAAGAATA TTTACGAGAT AGTAATAAAA GTGCTGATAC TGCTTTACCC AAAAATTATT ATCAAGATGA TGACGCCAGC AAATCACCCG TTGGCTCATG GCGTAGTCAT GGTAGTTTGC TCTATACTAA TTGGCTTAAC TACTATGTTT ATCAAATGAC GCCATATCAA TTAGATGCTT CAAATATTAG AGCTATTCAC CCTGATACTG TTATTTAG
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Protein sequence | MPIKIPDQLP ALSILDNENI FVMSENRAAS QEIRPMQVAI LNLMPNKIET EVQILRMLSN TPLQINIEFI RIHKNVSKNT PEEHLENFYH LFDDIKHKQY DGLIITGAPL ALLDYSQVKF WDKICEVFDW AEKNVTSTMF SCWAAHAALY HHYGLNRHLR KEKLSGVFKH KPLDDKESLT RGFDENFNVP HSRYGYIDKS DYESIPQIQI LAESADAGVY LAASKNKQQV YLTGHPEYDA STLHEEYLRD SNKSADTALP KNYYQDDDAS KSPVGSWRSH GSLLYTNWLN YYVYQMTPYQ LDASNIRAIH PDTVI
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