Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1099 |
Symbol | |
ID | 3518845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1117011 |
End bp | 1117775 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637283563 |
Product | hypothetical protein |
Protein accession | YP_267843 |
Protein GI | 71278550 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATC TGGCCCTTTG TTGGAGCCTA GCATTATTGA GTAGTGCTGT GTTTGCGGAC GGAGATAGAG GAGACGTTAG AGAGCGTATT GAACCGAAAG GTTTTTTGTA TGGCTTAGGT TTAGGTATCA ACCAAGAGAT ATATTCTGGC TATGATTATC GAGTCATTCC TTTACCTATT ATAGGTTACC GAGGTGATAA TTTTCGTGTT TTAGGGCCCT TCGTTAGTTA TGATGCATTG GAATTTTCTG ATATTGAATT GACTGTGCAG ATCGCCCCTC GATTTCAAGG CTTTGATGAG TCTGACAGTT TTATTTTTGA AAATATGCAA GAAAGAAAGT TTTCTATGGA TGCTGGATTA GGACTTTCTT ATCAGAAGAA GGACTGGAAA ATAGGCCTTT CAAGCATGTT TGATGTACTT GGCAGATCTA ATGGTTATGA AGCTAAAGCT AACATCTCGC GTGTGTTTCG CAAAGGTCCT TTGTTCTTTG AACCCAGTTT AAGTGTCAGC TATTTAGACA GCAATCATGT TGATTATTAT TATGGTGTGA AGGCAAACGA AACTAATGAA TTTACATCTC AATATCTTGG TAAATCCGCA CTAAATACTA CTATTTCTTT ATCCTTGGCC ACGCCCATTT TTTTAGGTGG CTTTACCCGT ATTGTAGTTG ATTACACTTG GTATGATTCA GTAATAACCA ATAGCCCATT GGTTGAAGAT GAAGCTAATA TGAGTGCTCG TTTTCTCTTT AGTAAGTTTT TTTAA
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Protein sequence | MKYLALCWSL ALLSSAVFAD GDRGDVRERI EPKGFLYGLG LGINQEIYSG YDYRVIPLPI IGYRGDNFRV LGPFVSYDAL EFSDIELTVQ IAPRFQGFDE SDSFIFENMQ ERKFSMDAGL GLSYQKKDWK IGLSSMFDVL GRSNGYEAKA NISRVFRKGP LFFEPSLSVS YLDSNHVDYY YGVKANETNE FTSQYLGKSA LNTTISLSLA TPIFLGGFTR IVVDYTWYDS VITNSPLVED EANMSARFLF SKFF
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