Gene CPS_1083 details

Gene Information

• Locus tag: CPS_1083
• Symbol: nqrD
• ID: 3522592
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1103233
• End bp: 1103856
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637283547
• Product: Na(+)-translocating NADH-quinone reductase subunit D
• Protein accession: YP_267827
• Protein GI: 71282119
• COG category: [C] Energy production and conversion
• COG ID: [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD
• TIGRFAM ID: [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTCAG ATACTAAAAA AGTCCTCTTC GGACCTGTTG TTGATAATAA CCCGATTGCA 
TTACAAGTAT TAGGTGTTTG TTCAGCGCTT GCTGTAACAA GCTCAATGGC TAATGCGTTA 
GTTATGACAC TTGCTGTAAT TGTGGTAACT GCATTTTCTA ACTTGTTTAT TTCGATTATC 
CGTAATCAAA TACCATCAAG TGTACGTATT ATTGTGCAAA TGGCGATTAT TGCTTCACTA 
GTAATTGTTG TTGACCAAGT ACTAAAAGCT TTCTCTTACC AATTATCGAA AGAATTATCG 
GTTTATATTG GTTTGATCAT TACTAACTGT ATCGTTATGG GTCGTGCTGA AGCTTTTGCT 
ATGAAAGAAA AGCCTGGCGT GAGCTTCTTA GACGGTATTG GTAACGGTTT AGGTTATGGC 
GCAGTCTTAA TGGTTGTCGC TTTCTTTCGT GAATTACTTG GCTTTGGTAA AGTTTTCGGT 
TTTGAAGTTC TACCATTAGT TCAAAACGGC GGCTGGTACC AAGGTAATGG TCTATTAGTG 
TTACCGTTTA GCTCATTCTT CATTATTGGT TTAATCATTT GGGCTGTACG CCAATGGAAA 
CCAGAACAAG TTGAGAAGGA TTAA 

 

Protein sequence

MSSDTKKVLF GPVVDNNPIA LQVLGVCSAL AVTSSMANAL VMTLAVIVVT AFSNLFISII 
RNQIPSSVRI IVQMAIIASL VIVVDQVLKA FSYQLSKELS VYIGLIITNC IVMGRAEAFA 
MKEKPGVSFL DGIGNGLGYG AVLMVVAFFR ELLGFGKVFG FEVLPLVQNG GWYQGNGLLV 
LPFSSFFIIG LIIWAVRQWK PEQVEKD