Gene CPS_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1052 
Symbol 
ID3520425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1078012 
End bp1078824 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content41% 
IMG OID637283516 
ProductM48 family peptidase 
Protein accessionYP_267796 
Protein GI71279962 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC CTCTCATTAT GCTTACCGCG TTAATCGCGC TTACTGCCTG TACAAGTTCT 
AGTACTGGTC GAAAACAAGT GATGTTATTT TCAGATGCAG AGCTTGATAA AATGGGCGCT
GCTTCATTTG AAGACATGAA AAAGAAAACA CCTATAAGCA CAGATAAAGC GACTAATGAC
TTTGTGCAAT GTGTTGCTAA ATCGATAACT AAAAATGTCG CTAAATCGGT TCATCAAGGT
GACTGGGAAG TTGTTGTGTT TGATTCCGCA CAAGTGAATG CTTTTGCTTT ACCTAGTGGT
AAAATTGGCG TCTACACCGG TATTTTAAAT GTGACTGAAA ATCAAGATCA GTTGGGTGCG
ATTATTGGAC ATGAGGTTGG TCATGTTATT GAACATCACT CAAATGAGCG TTTATCAGCT
AATAAACTGC AAAATATGGG GATGGCTGCT GCAACCGCCG CTGTTGGGTT ATCAGACGTG
GAAAATAAAG GCTTATGGAT GGCAGGATTA GGTTTGGGAC TGCAGTATGG CGTTATTATG
CCTTATAGTC GTGCTCATGA AAGTGAGGCT GATATTGTTG GCCAAGATCT GATGGCGCGT
TCTGGTTTCG AACCAAGCGC CAGTATTAAG CTTTGGCAAA ATATGGCGAA ATTAAGTAAG
GGGGCTCCGG CAGAGTTTAT GTCGACTCAT CCGTCAAATA AAACGCGTAT AAACCAGCTA
ACAGAACACT TACCTAGTGC TATGACTCTT TATAAAACAG ATAGCAGACC TAATTGTCAA
AAACCTAAAG TAATCCCTTC GCCGAAGGCG TAA
 
Protein sequence
MKLPLIMLTA LIALTACTSS STGRKQVMLF SDAELDKMGA ASFEDMKKKT PISTDKATND 
FVQCVAKSIT KNVAKSVHQG DWEVVVFDSA QVNAFALPSG KIGVYTGILN VTENQDQLGA
IIGHEVGHVI EHHSNERLSA NKLQNMGMAA ATAAVGLSDV ENKGLWMAGL GLGLQYGVIM
PYSRAHESEA DIVGQDLMAR SGFEPSASIK LWQNMAKLSK GAPAEFMSTH PSNKTRINQL
TEHLPSAMTL YKTDSRPNCQ KPKVIPSPKA