Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1052 |
Symbol | |
ID | 3520425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1078012 |
End bp | 1078824 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283516 |
Product | M48 family peptidase |
Protein accession | YP_267796 |
Protein GI | 71279962 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAC CTCTCATTAT GCTTACCGCG TTAATCGCGC TTACTGCCTG TACAAGTTCT AGTACTGGTC GAAAACAAGT GATGTTATTT TCAGATGCAG AGCTTGATAA AATGGGCGCT GCTTCATTTG AAGACATGAA AAAGAAAACA CCTATAAGCA CAGATAAAGC GACTAATGAC TTTGTGCAAT GTGTTGCTAA ATCGATAACT AAAAATGTCG CTAAATCGGT TCATCAAGGT GACTGGGAAG TTGTTGTGTT TGATTCCGCA CAAGTGAATG CTTTTGCTTT ACCTAGTGGT AAAATTGGCG TCTACACCGG TATTTTAAAT GTGACTGAAA ATCAAGATCA GTTGGGTGCG ATTATTGGAC ATGAGGTTGG TCATGTTATT GAACATCACT CAAATGAGCG TTTATCAGCT AATAAACTGC AAAATATGGG GATGGCTGCT GCAACCGCCG CTGTTGGGTT ATCAGACGTG GAAAATAAAG GCTTATGGAT GGCAGGATTA GGTTTGGGAC TGCAGTATGG CGTTATTATG CCTTATAGTC GTGCTCATGA AAGTGAGGCT GATATTGTTG GCCAAGATCT GATGGCGCGT TCTGGTTTCG AACCAAGCGC CAGTATTAAG CTTTGGCAAA ATATGGCGAA ATTAAGTAAG GGGGCTCCGG CAGAGTTTAT GTCGACTCAT CCGTCAAATA AAACGCGTAT AAACCAGCTA ACAGAACACT TACCTAGTGC TATGACTCTT TATAAAACAG ATAGCAGACC TAATTGTCAA AAACCTAAAG TAATCCCTTC GCCGAAGGCG TAA
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Protein sequence | MKLPLIMLTA LIALTACTSS STGRKQVMLF SDAELDKMGA ASFEDMKKKT PISTDKATND FVQCVAKSIT KNVAKSVHQG DWEVVVFDSA QVNAFALPSG KIGVYTGILN VTENQDQLGA IIGHEVGHVI EHHSNERLSA NKLQNMGMAA ATAAVGLSDV ENKGLWMAGL GLGLQYGVIM PYSRAHESEA DIVGQDLMAR SGFEPSASIK LWQNMAKLSK GAPAEFMSTH PSNKTRINQL TEHLPSAMTL YKTDSRPNCQ KPKVIPSPKA
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