Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1040 |
Symbol | dinB |
ID | 3521759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1067233 |
End bp | 1068291 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283505 |
Product | DNA polymerase IV |
Protein accession | YP_267789 |
Protein GI | 71281288 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAATC AGAAAAAAAT AATTCACATT GATATGGACT GCTTTTATGC TGCTATTGAA ATGCGAGATT TTCCTGAATA TCAAAATATC CCATTGGCCG TTGGTGGTGA TGGCCCGCGT AGTGTCTTAT GTACTAGTAA TTATCAAGCT CGTCAGTTTG GTGTCCGTTC AGCCATGCCG GCGATTAAAG CCAAACAGCT TTGTCCACAC CTTAAAATTG TTCATGGCCG CATGGATGTT TATAAAGAAA CCTCCAAAAA TATTAGAGAA ATATTTTCTC GTTATACCGA TCTCATTGAA CCTTTATCTT TAGATGAGGC CTATCTGGAT GTTACTGATG CAACAATGTG TCAGGGTAGT GCAACGCTTA TTGCTGAGAG AATTAGAGCT GATATCTTTA ATGAATTAAA TTTAACGGCA TCAGCAGGCA TTGCACCGAA TAAGTTTTTA GCAAAAATTG CCAGTGATGA AAATAAACCT AATGGTCAAT GCGTTATTAC CCCAGATAAA GTCGCTAACT TTGTTGAACA ACTTTCATTA AAGAAAATAC CCGGTATTGG TCCAAAAACG TTTGAAAAAT TAAATAGGCA TGGTTATGTA ACTTGTGCTG ATGTACGTCA AAGTAATATT CGAGCGCTAC AAAATATTGT CGGTAAGTTT GCTAATAGCT TGTACTTAAA ATCACATGGT GTCGATAATC GAGATTTAGA AGTCAGCCGG CAACGCAAAT CTCTCGCCAT CGAAACAACA TTGGCGCACG ATATATCTAC TCAAGATGAG TGTAAGCTTG TTATTGATTC CTTATACCAA AAATTACTCA CTAGACTCGC TCCCCACAGT AATAGGGAAA TCATTAGGCA AGGTGTGAAG CTTAAGTTTA CTGATTTTAA TCAAACAACC GTAGAAACAC AAAGCAACGA GTGTCAGCAA GCCCTTTTTA TCAGTTTATT ATCAAAGGCA TATAGCCGCT CAAATAAACG CGGTGTACGG CTTGTTGGTC TAACACTAGG ATTTGCTGAT AGTCCAGGCG AAAGTCAGCA GTTGTCTCTT TCGCTATAG
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Protein sequence | MGNQKKIIHI DMDCFYAAIE MRDFPEYQNI PLAVGGDGPR SVLCTSNYQA RQFGVRSAMP AIKAKQLCPH LKIVHGRMDV YKETSKNIRE IFSRYTDLIE PLSLDEAYLD VTDATMCQGS ATLIAERIRA DIFNELNLTA SAGIAPNKFL AKIASDENKP NGQCVITPDK VANFVEQLSL KKIPGIGPKT FEKLNRHGYV TCADVRQSNI RALQNIVGKF ANSLYLKSHG VDNRDLEVSR QRKSLAIETT LAHDISTQDE CKLVIDSLYQ KLLTRLAPHS NREIIRQGVK LKFTDFNQTT VETQSNECQQ ALFISLLSKA YSRSNKRGVR LVGLTLGFAD SPGESQQLSL SL
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