Gene CPS_1024 details

Gene Information

• Locus tag: CPS_1024
• ID: 3518786
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1049205
• End bp: 1049906
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637283489
• Product: hypothetical protein
• Protein accession: YP_267773
• Protein GI: 71278608

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATCTA TTAAAGCTAT TAACAACAGT GCTCACGGTA ACGTTAAAGT TAAAAGTAAT 
CCAAGCTTTA TACAAAGTAA GACCAAGCAC TTTGCTCCAG TGGTAGTTCA AGAGTTTATT 
AGTGCCAGTA AAGAGTTTCC TATCGTCTTT ATTAAAGATG CTGAAACTGG CCGCTTTAAT 
GCCGTAGTAT TACTTGGTTT GAAACCACAA GAGAATTTGT TTTTTGATGA AAAATCTTGG 
CAGGGGAGCT ATATACCAGA AGCGCTTACT CTTTATCCTT TCGTCATCCA TCAAGCTGAA 
GGAAGTGATA AAGCCCTTTT ATGTGTTGAT GAAGACTCGG CATTAGTGAA TGAAACAATA 
GGTGATGCTT TTTTTGATGA AAAAGGCGTT CAAAAAGAAT GGTTAACAGC CAAAGGTGAA 
GCTGTTGTTG ACTATGTAAA CAAAAGTGGC GTAACGCAGA ATTTCATTCA ACTATTATTA 
GCTAAAGAAT TACTAGCGCC ACAAACGTTG AGTTTAAACC TAGCAGGGCA AGAAGAATAT 
ACTTTAGATG GTTTGTACGT TATTAATGAA CAAAAACTGA ATGACCTATC CGATAGTGAG 
TTTTCTGAGT TAAGAAAAAC TAATGCGTTA CCTGCTATTT ACGCAATATT AATGTCAATG 
CAATGTATTA AGAAATTAAT CGACAGACAA TCAAGTAAAT AG 

 

Protein sequence

MASIKAINNS AHGNVKVKSN PSFIQSKTKH FAPVVVQEFI SASKEFPIVF IKDAETGRFN 
AVVLLGLKPQ ENLFFDEKSW QGSYIPEALT LYPFVIHQAE GSDKALLCVD EDSALVNETI 
GDAFFDEKGV QKEWLTAKGE AVVDYVNKSG VTQNFIQLLL AKELLAPQTL SLNLAGQEEY 
TLDGLYVINE QKLNDLSDSE FSELRKTNAL PAIYAILMSM QCIKKLIDRQ SSK