Gene CPS_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0943 
SymbolbdhA1 
ID3520775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp952016 
End bp952828 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content42% 
IMG OID637283408 
ProductD-beta-hydroxybutyrate dehydrogenase 
Protein accessionYP_267692 
Protein GI71280310 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.801002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAA GTACTCCATT ACAAAGCACA ACATTGAAAG GTAAAACAGC ACTTATTACT 
GGTTCAACAA GTGGTATTGG CTTAGCCAGT GCTCACGTAT TGGCTGAGCA AGGTATTAAT
TTAGTCTTAC ATGGTTTGAT GAGCGATGAT GAAGGCGCTA ACCTAGCGCA GGAGTTTTCT
GAAAAATATC AAATAAAAAC CTTATTCGAT AATGCTAACT TAATGGACAC AAGTGCCATC
AGCGTTTTTA TGGATAAAGC CACAAAAACG ATGGGCTCGA TTGATATCTT GATCAACAAT
GCAGGTATTC AACATACAGA AGCAGTGGAT ACTTTTCCAG AGAGTAAATG GAATGCCATC
ATTGCCATTA ATTTAACCGC TGCCTTTCAT ACGACTCAGC ACGCTTTAAG TGGTATGAAA
GCCAACTCAT GGGGCAGAAT TGTTAATATT GCTTCTGTTC ATGGCCTTGT TGCCTCTAAA
AATAAAGTCG CATATTGTGC AGCAAAACAT GGCATTGTTG GCCTGACCAA AGTCGTTGCT
CTTGAGTGCG CAGAACATGG CATTACTGCC AATGCTATTT GTCCAGGCTG GGTAGATACG
CCACTTATCA ATGATCAAAT CACTGAAATT GCCAATAAAG AAAGTACCAG CTTTGAGCAA
GCAAAATACC AACTTATTAC CGCCAAACAG CCTGTACCTG ATATGATGGC GCCTCGTCAA
ATTGGTGAGT TCATCCTCTT TCTTTGCAGT GATAGTGCCC GCAGCATTAC CGGTTCGTCA
TTGCCTATGG ATGGCGCTTG GACCGCTCAA TAA
 
Protein sequence
MLESTPLQST TLKGKTALIT GSTSGIGLAS AHVLAEQGIN LVLHGLMSDD EGANLAQEFS 
EKYQIKTLFD NANLMDTSAI SVFMDKATKT MGSIDILINN AGIQHTEAVD TFPESKWNAI
IAINLTAAFH TTQHALSGMK ANSWGRIVNI ASVHGLVASK NKVAYCAAKH GIVGLTKVVA
LECAEHGITA NAICPGWVDT PLINDQITEI ANKESTSFEQ AKYQLITAKQ PVPDMMAPRQ
IGEFILFLCS DSARSITGSS LPMDGAWTAQ