Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0943 |
Symbol | bdhA1 |
ID | 3520775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 952016 |
End bp | 952828 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637283408 |
Product | D-beta-hydroxybutyrate dehydrogenase |
Protein accession | YP_267692 |
Protein GI | 71280310 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.801002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA GTACTCCATT ACAAAGCACA ACATTGAAAG GTAAAACAGC ACTTATTACT GGTTCAACAA GTGGTATTGG CTTAGCCAGT GCTCACGTAT TGGCTGAGCA AGGTATTAAT TTAGTCTTAC ATGGTTTGAT GAGCGATGAT GAAGGCGCTA ACCTAGCGCA GGAGTTTTCT GAAAAATATC AAATAAAAAC CTTATTCGAT AATGCTAACT TAATGGACAC AAGTGCCATC AGCGTTTTTA TGGATAAAGC CACAAAAACG ATGGGCTCGA TTGATATCTT GATCAACAAT GCAGGTATTC AACATACAGA AGCAGTGGAT ACTTTTCCAG AGAGTAAATG GAATGCCATC ATTGCCATTA ATTTAACCGC TGCCTTTCAT ACGACTCAGC ACGCTTTAAG TGGTATGAAA GCCAACTCAT GGGGCAGAAT TGTTAATATT GCTTCTGTTC ATGGCCTTGT TGCCTCTAAA AATAAAGTCG CATATTGTGC AGCAAAACAT GGCATTGTTG GCCTGACCAA AGTCGTTGCT CTTGAGTGCG CAGAACATGG CATTACTGCC AATGCTATTT GTCCAGGCTG GGTAGATACG CCACTTATCA ATGATCAAAT CACTGAAATT GCCAATAAAG AAAGTACCAG CTTTGAGCAA GCAAAATACC AACTTATTAC CGCCAAACAG CCTGTACCTG ATATGATGGC GCCTCGTCAA ATTGGTGAGT TCATCCTCTT TCTTTGCAGT GATAGTGCCC GCAGCATTAC CGGTTCGTCA TTGCCTATGG ATGGCGCTTG GACCGCTCAA TAA
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Protein sequence | MLESTPLQST TLKGKTALIT GSTSGIGLAS AHVLAEQGIN LVLHGLMSDD EGANLAQEFS EKYQIKTLFD NANLMDTSAI SVFMDKATKT MGSIDILINN AGIQHTEAVD TFPESKWNAI IAINLTAAFH TTQHALSGMK ANSWGRIVNI ASVHGLVASK NKVAYCAAKH GIVGLTKVVA LECAEHGITA NAICPGWVDT PLINDQITEI ANKESTSFEQ AKYQLITAKQ PVPDMMAPRQ IGEFILFLCS DSARSITGSS LPMDGAWTAQ
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