Gene CPS_0937 details

Gene Information

• Locus tag: CPS_0937
• ID: 3519328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 943259
• End bp: 943930
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283402
• Product: LuxR family DNA-binding response regulator
• Protein accession: YP_267686
• Protein GI: 71279165
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.715087
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACAAG CAAAAGTTAT TATTGCCGAT GATCATCCGT TATTTCGTAC GGCACTTAAA 
CAAGCAATTA TCGAATGTAT TGATGATGCC GGCACGTTAG AAGCCGACAA CTTTAGTGAA 
CTATTAATTG CTATTGAAGC CACTCCGAGT CTAGAAATCG TTTTTCTCGA TTTGCATATG 
CCAGGTAATG ATGGTTTTAC CGGACTTACT CAGCTGCAAA ACCACTACCC CGATTTAGTG 
GTGATTATGG TGTCTTCTGA TGATAATGAT GAGACCATGC AAAAAGCGAT TAACTTTGGT 
GCTGCAGCAT TTATTCCTAA ATCAGCCGAC TTGACTACCA TTGCTAGTGC CATTGATACA 
GTATTGATGG GTGATATTTG GTTACCTGAA TTGATAGAAA AAAATGCAGG CCAACAAACC 
GCACTTGCTC ATCAAAAACT CGCTAAACAG CTAGGACAAT TAACGCCGCA ACAGTACGTA 
GTGTTAACTC AAATTGCTGA TGGTCAACTC AATAAGCAGA TTGCTTATTA TCTCAACATC 
AAAGAAACTA CAGTGAAAAA ACATGTTTCA GCTATTTTGG AAAAGTTGGA AGTGAATAAT 
CGAACGTTAG CAGGGCTTGC TTATCAGCAG CTGATGTTGT CGCCAACAGA GAATGTTAAT 
AGCCCCATCT AA 

 

Protein sequence

MSQAKVIIAD DHPLFRTALK QAIIECIDDA GTLEADNFSE LLIAIEATPS LEIVFLDLHM 
PGNDGFTGLT QLQNHYPDLV VIMVSSDDND ETMQKAINFG AAAFIPKSAD LTTIASAIDT 
VLMGDIWLPE LIEKNAGQQT ALAHQKLAKQ LGQLTPQQYV VLTQIADGQL NKQIAYYLNI 
KETTVKKHVS AILEKLEVNN RTLAGLAYQQ LMLSPTENVN SPI